chr5 : 56,639,424 56,639,820
396 bp 36 TFs 0 linked genes
This 396 bp open chromatin element has no linked target genes and is bound by 36 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:56,634,424 – 56,644,820
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP A-549 GSE119863.BRD3.A-549 262 bp overlap
BRD4 3 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 194 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 225 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 195 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 383 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 244 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 249 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 372 bp overlap
ChIP DE DE-GATA4-2 396 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 275 bp overlap
ChIP foregut GSE117136.GATA4.foregut 348 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 396 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 332 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 261 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 205 bp overlap
ChIP DE DE-GATA6-1 386 bp overlap
ChIP DE DE-GATA6-2 396 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 273 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 241 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 396 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 337 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 297 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 238 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 390 bp overlap
ChIP foregut GSE117136.GATA6.foregut 375 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 247 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 396 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 306 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 331 bp overlap
HNF4A 1 dataset
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 157 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 396 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE79899.KMT2A.MV4-11 340 bp overlap
NCAPH2 2 datasets
ChIP RMG-I GSE120058.NCAPH2.RMG-I 396 bp overlap
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 177 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 156 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 396 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 113 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 50 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 367 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 215 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 111 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 159 bp overlap
STAT3 2 datasets
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 188 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 259 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 193 bp overlap
TP53 1 dataset
ChIP MOLM-13_R282W_Daunorubicin GSE131484.TP53.MOLM-13_R282W_Daunorubicin 209 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 314 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF265CEM 59 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 396 bp overlap
YAP1 1 dataset
ChIP H69 GSE62274.YAP1.H69 152 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 58 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 105 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 231 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 132 bp overlap
ZNF501 1 dataset
ChIP HEK293 ENCFF066RAQ 202 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 307 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 214 bp overlap