chr5 : 53,488,242 53,488,597
355 bp 34 TFs 1 linked gene
This 355 bp open chromatin element is linked to FST and is bound by 34 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FST 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:53,483,242 – 53,493,597
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
BRD4 4 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 197 bp overlap
ChIP CHL-1 GSE95585.BRD4.CHL-1 228 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 204 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 161 bp overlap
CHD4 1 dataset
ChIP keratinocyte_CTR GSE139685.CHD4.keratinocyte_CTR 172 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 266 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 264 bp overlap
CTCF 1 dataset
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 174 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 131 bp overlap
ESR1 1 dataset
ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 123 bp overlap
FOSL2 1 dataset
ChIP SK-N-SH ENCFF127ZDW 250 bp overlap
FOXA1 2 datasets
ChIP LNCaP GSE64656.FOXA1.LNCaP 123 bp overlap
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 77 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 279 bp overlap
ChIP DE DE-FOXA2-2 355 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 115 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 208 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 292 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE107730.INO80.Hep-G2 355 bp overlap
ChIP Hep-G2 GSE97411.INO80.Hep-G2 253 bp overlap
JUND 4 datasets
ChIP SK-N-SH ENCFF551NEQ 313 bp overlap
ChIP SK-N-SH ENCFF551NEQ 163 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 355 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 355 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 150 bp overlap
MBD4 1 dataset
ChIP Hep-G2 ENCSR000BQW.MBD4.Hep-G2 81 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 291 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 352 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 120 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 199 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 355 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 253 bp overlap
SIN3A 3 datasets
ChIP HepG2 ENCFF394WQQ 73 bp overlap
ChIP SK-N-SH ENCFF931NFD 268 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 355 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 355 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 247 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 320 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 355 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d0 349 bp overlap
SRF 1 dataset
ChIP HepG2 ENCFF234ZEU 297 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 238 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 231 bp overlap
YY1 1 dataset
ChIP SK-N-SH ENCFF087JSD 293 bp overlap
ZBTB33 2 datasets
ChIP SK-N-SH ENCFF667JYU 166 bp overlap
ChIP SK-N-SH ENCSR000BTS.ZBTB33.SK-N-SH 265 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 80 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 180 bp overlap