chr1 : 77,983,355 77,983,855
500 bp 37 TFs 3 linked genes
This 500 bp open chromatin element is linked to GIPC2, DNAJB4, and FUBP1 and is bound by 37 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
GIPC2 3.8 kb Proximal Proximity
DNAJB4 4.1 kb Proximal Proximity
FUBP1 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:77,978,355 – 77,988,855
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 123 bp overlap
ATOH8 2 datasets
ChIP A-549 ENCSR161CZA.ATOH8.A-549 75 bp overlap
ChIP A549 ENCFF772HNB 167 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 382 bp overlap
EHF 2 datasets
ChIP A-549 ENCSR171TDM.EHF.A-549 76 bp overlap
ChIP A549 ENCFF352AOI 161 bp overlap
FOXA1 4 datasets
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 72 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 118 bp overlap
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 99 bp overlap
FOXA2 5 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 77 bp overlap
ChIP DE DE-FOXA2-1 359 bp overlap
ChIP DE DE-FOXA2-2 354 bp overlap
ChIP HepG2 ENCFF570ABM 244 bp overlap
ChIP HepG2 ENCFF894AYY 381 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 361 bp overlap
FOXF2 1 dataset
ChIP A549 ENCFF148XDC 159 bp overlap
FOXS1 1 dataset
ChIP A549 ENCFF870VDS 196 bp overlap
HEYL 1 dataset
ChIP A549 ENCFF588UHP 168 bp overlap
HNF1A 2 datasets
ChIP HepG2 ENCFF352VYI 410 bp overlap
ChIP HepG2 ENCFF540TRC 485 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 204 bp overlap
HOXB13 2 datasets
ChIP A-549 ENCSR967ZMR.HOXB13.A-549 111 bp overlap
ChIP A549 ENCFF870NOA 157 bp overlap
HOXB5 2 datasets
ChIP A-549 ENCSR748HJZ.HOXB5.A-549 90 bp overlap
ChIP A549 ENCFF891VDO 161 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCFF159QSW 249 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 312 bp overlap
MIXL1 1 dataset
ChIP HepG2 ENCFF817YFO 102 bp overlap
PBX1 2 datasets
ChIP A-549 ENCSR637RKG.PBX1.A-549 84 bp overlap
ChIP A549 ENCFF475JCE 165 bp overlap
POLR2A 3 datasets
ChIP body of pancreas ENCFF501FEC 273 bp overlap
ChIP body of pancreas ENCFF675RCN 332 bp overlap
ChIP body of pancreas ENCFF727UBE 111 bp overlap
PRDM1 1 dataset
ChIP A549 ENCFF012KDW 159 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCFF069PHD 66 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 144 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 469 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 186 bp overlap
SIN3A 2 datasets
ChIP A549 ENCFF752ATT 475 bp overlap
ChIP A549 ENCFF752ATT 436 bp overlap
TP63 1 dataset
ChIP A549 ENCFF399JYQ 215 bp overlap
WT1 1 dataset
ChIP HEK293 ENCFF906HIR 218 bp overlap
YY1 1 dataset
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 58 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCFF638TIB 335 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 223 bp overlap
ZNF302 1 dataset
ChIP A549 ENCFF333REI 139 bp overlap
ZNF592 3 datasets
ChIP GM12878 ENCFF818ABS 161 bp overlap
ChIP GM12878 ENCSR173ZVL.ZNF592.GM12878 92 bp overlap
ChIP K562 ENCFF547OSS 165 bp overlap
ZNF624 2 datasets
ChIP A-549 ENCSR419VVI.ZNF624.A-549 87 bp overlap
ChIP A549 ENCFF802OXN 170 bp overlap
ZNF652 3 datasets
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 52 bp overlap
ChIP HepG2 ENCFF331VPZ 381 bp overlap
ChIP HepG2 ENCFF331VPZ 195 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 247 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 75 bp overlap
ZSCAN20 1 dataset
ChIP A549 ENCFF611TGC 155 bp overlap