chr4 : 102,340,733 102,341,693
960 bp 31 TFs 1 linked gene
This 960 bp open chromatin element is linked to SLC39A8 and is bound by 31 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SLC39A8 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:102,335,733 – 102,346,693
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 189 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 295 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 215 bp overlap
ChIP DE DE-FOXA2-1 766 bp overlap
ChIP DE DE-FOXA2-2 725 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF781VSC 341 bp overlap
GATA2 2 datasets
ChIP SKH1 GSE87283.GATA2.SKH1 241 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 446 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 220 bp overlap
ChIP DE DE-GATA4-1 386 bp overlap
ChIP DE DE-GATA4-2 957 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 82 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 696 bp overlap
ChIP DE DE-GATA6-2 926 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 409 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 329 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 387 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 314 bp overlap
ChIP K562 ENCFF744ALD 200 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 272 bp overlap
ChIP K562 ENCFF055GAZ 531 bp overlap
ChIP K562 ENCFF055GAZ 531 bp overlap
KDM1A 3 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 191 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 130 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 227 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 254 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 195 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 140 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 162 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 186 bp overlap
NR2C1 2 datasets
ChIP GM12878 ENCFF101ELO 196 bp overlap
ChIP GM12878 ENCSR784VIQ.NR2C1.GM12878 147 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCFF273VKX 166 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF674RQA 117 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 239 bp overlap
RELA 4 datasets
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 222 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 232 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 181 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 651 bp overlap
RUNX1 3 datasets
ChIP SKH1 GSE87283.RUNX1.SKH1 204 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 166 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 146 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 297 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 456 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 315 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 472 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 398 bp overlap
SPI1 18 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 175 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 302 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 216 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 332 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 232 bp overlap
ChIP GM12878 ENCFF134LCP 297 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 162 bp overlap
ChIP HL-60 ENCFF645GBT 271 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 224 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 146 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 182 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 107 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 188 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 158 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 130 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 488 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 99 bp overlap