chr4 : 16,890,695 – 16,890,949
254 bp 40 TFs 1 linked gene
This 254 bp open chromatin element is linked to LDB2 and is bound by 40 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LDB2 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:16,885,695 – 16,895,949
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 207 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 254 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 168 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 239 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 243 bp overlap
ERG 7 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 147 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 142 bp overlap
ChIP Jurkat GSE49091.ERG.Jurkat 232 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 254 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 254 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 156 bp overlap
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 161 bp overlap
ETS1 12 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 254 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 254 bp overlap
ChIP HUVEC-C GSE109625.ETS1.HUVEC-C 126 bp overlap
ChIP HUVEC-C GSE93030.ETS1.HUVEC-C 126 bp overlap
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 186 bp overlap
ChIP HUVEC-C_1h GSE93030.ETS1.HUVEC-C_1h 173 bp overlap
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 154 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 186 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.ETS1.HUVEC-C_VEGF_1h 173 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 75 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 154 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 145 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 123 bp overlap
ETV2 1 dataset
ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 135 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 254 bp overlap
FLI1 3 datasets
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 254 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 207 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 202 bp overlap
GATA2 3 datasets
ChIP HUVEC-C_VEGF_4h GSE109625.GATA2.HUVEC-C_VEGF_4h 68 bp overlap
ChIP TSU-1621MT GSE60477.GATA2.TSU-1621MT 241 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 123 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 254 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 203 bp overlap
ChIP DE DE-GATA4-2 254 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 229 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 254 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 254 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 225 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 254 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 254 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 254 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 113 bp overlap
HSF1 1 dataset
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 227 bp overlap
IKZF1 1 dataset
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 197 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 254 bp overlap
LMO2 3 datasets
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 155 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 254 bp overlap
LYL1 1 dataset
ChIP TSU-1621MT GSE60477.LYL1.TSU-1621MT 238 bp overlap
MLLT3 1 dataset
ChIP THP-1 GSE79899.MLLT3.THP-1 199 bp overlap
MYB 3 datasets
ChIP DU528 GSE94000.MYB.DU528 254 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 190 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 254 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 254 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 254 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 254 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 217 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 157 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 122 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 187 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 154 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 237 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 254 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 254 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 254 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 179 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 254 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 211 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 254 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 124 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 208 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 254 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 254 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 230 bp overlap
SPI1 13 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 136 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 254 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 135 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 254 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 149 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 187 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 121 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 131 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 176 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 139 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 106 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 94 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 132 bp overlap
TAL1 4 datasets
ChIP CCRF-CEM GSE33850.TAL1.CCRF-CEM 157 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 254 bp overlap
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 196 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 254 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 222 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 185 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 235 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 198 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 106 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 164 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 161 bp overlap
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