chr3 : 159,516,639 – 159,517,192

553 bp 61 TFs 0 linked genes

This 553 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

61 transcription factors

EMSY 1 dataset

ChIP K562 ENCFF511ZZZ 145 bp overlap

EOMES 3 datasets

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 170 bp overlap

ESR1 1 dataset

ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 123 bp overlap

FIGLA 2 datasets

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

Hmx1 1 dataset

Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap

Hmx3 1 dataset

Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap

ISL2 1 dataset

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

MAFG 1 dataset

ChIP K-562 ENCSR818DQV.MAFG.K-562 82 bp overlap

MAFK 3 datasets

ChIP MCF-7 ENCFF558JLG 66 bp overlap

ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 98 bp overlap

ChIP WA01 ENCSR000EBS.MAFK.WA01 66 bp overlap

MECOM 1 dataset

ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 129 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

NFIL3 1 dataset

Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 166 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU4F1 1 dataset

Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap

POU4F2 1 dataset

Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap

POU4F3 1 dataset

Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap

POU5F1 1 dataset

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

PRDM1 2 datasets

Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap

Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap

Pgr 2 datasets

Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap

Motif DE_36h DE_36h-Pgr_MA2323.1 17 bp overlap

RARA 2 datasets

Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap

Motif DE_36h DE_36h-RARA_MA0730.1 17 bp overlap

SIX2 1 dataset

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

SOX12 2 datasets

Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap

Motif DE_36h DE_36h-SOX12_MA1561.2 10 bp overlap

SOX14 2 datasets

Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap

Motif DE_36h DE_36h-SOX14_MA1562.2 9 bp overlap

SOX18 2 datasets

Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap

Motif DE_36h DE_36h-SOX18_MA1563.2 8 bp overlap

SOX4 2 datasets

Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap

Motif DE_36h DE_36h-SOX4_MA0867.3 8 bp overlap

SOX8 2 datasets

Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap

Motif DE_36h DE_36h-SOX8_MA0868.3 7 bp overlap

SOX9 2 datasets

Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap

Motif DE_36h DE_36h-SOX9_MA0077.2 8 bp overlap

Sox1 1 dataset

Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap

Sox11 2 datasets

Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap

Motif DE_36h DE_36h-Sox11_MA0869.3 8 bp overlap

Sox17 2 datasets

Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap

Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap

Sox5 2 datasets

Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap

Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap

Sox6 2 datasets

Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap

Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap

Sox7 2 datasets

Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap

Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap

Stat5a::Stat5b 2 datasets

Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap

Motif DE_36h DE_36h-Stat5aStat5b_MA0519.2 9 bp overlap

Stat5b 2 datasets

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

Motif DE_36h DE_36h-Stat5b_MA1625.2 9 bp overlap

Stat6 2 datasets

Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap

Motif DE_36h DE_36h-Stat6_MA0520.2 10 bp overlap

TBR1 2 datasets

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap

TBX18 2 datasets

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap

TBX2 2 datasets

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap

TBX20 2 datasets

Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap

Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap

TBX21 4 datasets

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap

TBX3 2 datasets

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap

Tbx6 2 datasets

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

ZBTB12 1 dataset

Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap

ZEB1 2 datasets

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

ZNF205 1 dataset

ChIP HEK293T GSE78099.ZNF205.HEK293T 184 bp overlap

ZNF528 2 datasets

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap

Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap

ZNF75A 2 datasets

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap

ZNF75D 2 datasets

Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap

Motif DE_36h DE_36h-ZNF75D_MA1601.2 12 bp overlap

ZSCAN4 2 datasets

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap

Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap

Zic1::Zic2 2 datasets

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap

Zic3 2 datasets

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap

Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap