chr3 : 123,457,914 – 123,458,148

234 bp 45 TFs 1 linked gene

This 234 bp open chromatin element is linked to ADCY5 and is bound by 45 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ADCY5		8.8 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

45 transcription factors

BACH1 1 dataset

Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 121 bp overlap

E2F1 1 dataset

ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 230 bp overlap

FOS::JUN 1 dataset

Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap

FOS::JUNB 1 dataset

Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap

FOS::JUND 1 dataset

Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap

FOSB::JUNB 1 dataset

Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap

FOSL1 1 dataset

Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap

FOSL1::JUN 1 dataset

Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap

FOSL1::JUNB 1 dataset

Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap

FOSL1::JUND 1 dataset

Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap

FOSL2 1 dataset

Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap

FOSL2::JUN 1 dataset

Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap

FOSL2::JUNB 1 dataset

Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap

FOSL2::JUND 1 dataset

Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap

FOXA1 3 datasets

ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 162 bp overlap

ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 141 bp overlap

ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 159 bp overlap

FOXP4 1 dataset

ChIP WTC11 ENCFF708TAF 222 bp overlap

GATA6 2 datasets

ChIP DE_D1 S41-DE-d1-GATA6-exp2 135 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 210 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 234 bp overlap

Hmx3 1 dataset

Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap

JUN 7 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 234 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 234 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 234 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 234 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 234 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 234 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 234 bp overlap

JUNB 1 dataset

Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap

JUND 2 datasets

Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap

ChIP WA01 ENCSR000EBZ.JUND.WA01 144 bp overlap

Jun 1 dataset

Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap

MITF 1 dataset

ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 143 bp overlap

NANOG 10 datasets

ChIP GM23338 ENCFF065NZG 225 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 134 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 234 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 234 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 178 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 234 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 234 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 234 bp overlap

ChIP hESC GSE18292.NANOG.hESC 101 bp overlap

ChIP hESC GSE20650.NANOG.hESC 152 bp overlap

POU5F1 4 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 234 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 234 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 181 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 114 bp overlap

PROX1 1 dataset

ChIP SW480 GSE60390.PROX1.SW480 188 bp overlap

SATB1 1 dataset

Motif DE_12h DE_12h-SATB1_MA1963.2 7 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 234 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 234 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 234 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 158 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 234 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 234 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 234 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 234 bp overlap

TBX18 1 dataset

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 219 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 180 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 234 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 174 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 156 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 205 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 150 bp overlap

ZNF75A 1 dataset

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

ZNF75D 1 dataset

Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap

ZNF784 1 dataset

Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap