Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

45 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 289 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 62 bp overlap

BRD4 1 dataset

ChIP HAP1 GSE108387.BRD4.HAP1 382 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 172 bp overlap

CHD7 4 datasets

ChIP H1 ENCFF126NLU 300 bp overlap

ChIP H1 ENCFF126NLU 92 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 62 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 231 bp overlap

CTCF 6 datasets

ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 157 bp overlap

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 382 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 182 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 102 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 342 bp overlap

ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 164 bp overlap

EP300 1 dataset

ChIP hESC GSE17917.EP300.hESC 382 bp overlap

EZH2_phosphoT487 1 dataset

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 175 bp overlap

FOXA1 3 datasets

ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 54 bp overlap

ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 83 bp overlap

ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 218 bp overlap

HDAC2 1 dataset

ChIP H1 ENCFF939VKA 172 bp overlap

JUN 9 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 363 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 382 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 382 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 382 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 289 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 371 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 382 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 382 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 382 bp overlap

KLF4 4 datasets

ChIP HAP1 GSE130417.KLF4.HAP1 247 bp overlap

ChIP WA09 GSE105028.KLF4.WA09 254 bp overlap

ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 221 bp overlap

ChIP hiPSC GSE56567.KLF4.hiPSC 246 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 167 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 284 bp overlap

NANOG 9 datasets

ChIP GM23338 ENCFF065NZG 267 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 198 bp overlap

ChIP H1 ENCFF747ZPQ 215 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 382 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 382 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 382 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 382 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 382 bp overlap

ChIP hESC GSE18292.NANOG.hESC 206 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 231 bp overlap

NUTM1 1 dataset

ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 62 bp overlap

POU1F1 1 dataset

Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU3F1 1 dataset

Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap

POU5F1 11 datasets

ChIP GM23338 ENCFF333SNB 232 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 382 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 263 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 378 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 206 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 253 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 150 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 382 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 382 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 259 bp overlap

POU5F1B 1 dataset

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 323 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm15 1 dataset

Motif ES_0h ES_0h-Prdm15_MA1616.2 11 bp overlap

RAD21 4 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 382 bp overlap

ChIP HAP1 GSE126634.RAD21.HAP1 382 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 382 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 286 bp overlap

SIN3A 5 datasets

ChIP H1 ENCFF042ZSL 382 bp overlap

ChIP H1 ENCFF042ZSL 193 bp overlap

ChIP H1 ENCFF896IJG 205 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 106 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 97 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 283 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 337 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 173 bp overlap

SMARCA4 3 datasets

ChIP NSC GSE125033.SMARCA4.NSC 256 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 288 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 331 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 382 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 335 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 262 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 327 bp overlap

SOX2 4 datasets

ChIP HNSC GSE69479.SOX2.HNSC 193 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 292 bp overlap

ChIP hESC GSE18292.SOX2.hESC 203 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 317 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 117 bp overlap

STAT3 1 dataset

ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 50 bp overlap

TBP 2 datasets

ChIP hESC GSE122298.TBP.hESC 382 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 297 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 382 bp overlap

TEAD4 1 dataset

ChIP hESC GSE99202.TEAD4.hESC 195 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 382 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 248 bp overlap

Genome Browser