chr3 : 33,875,525 33,876,040
515 bp 40 TFs 0 linked genes
This 515 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:33,870,525 – 33,881,040
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 19 datasets
ChIP 22Rv1 GSE96652.AR.22Rv1 249 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 132 bp overlap
ChIP LNCaP GSE94682.AR.LNCaP 110 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 121 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 122 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 134 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 104 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 139 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 161 bp overlap
ChIP LNCaP_DHT GSE83860.AR.LNCaP_DHT 82 bp overlap
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 105 bp overlap
ChIP LNCaP_M253K_shFOXA1_Ethanol GSE128883.AR.LNCaP_M253K_shFOXA1_Ethanol 122 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 133 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 132 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 111 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 246 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 180 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 85 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 78 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 219 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 237 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 236 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 168 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 168 bp overlap
FOXA1 17 datasets
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 357 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 146 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 329 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 141 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 133 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 78 bp overlap
ChIP LNCaP_DMSO GSE114274.FOXA1.LNCaP_DMSO 122 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 155 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 119 bp overlap
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 58 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 117 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 221 bp overlap
ChIP LNCaP_UPF1069 GSE114274.FOXA1.LNCaP_UPF1069 108 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 238 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 227 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 226 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 108 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 338 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 199 bp overlap
ChIP DE DE-FOXA2-1 515 bp overlap
ChIP DE DE-FOXA2-2 515 bp overlap
GATA2 5 datasets
ChIP ESF GSE108408.GATA2.ESF 329 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 234 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 234 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 164 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 156 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 143 bp overlap
ChIP DE DE-GATA4-1 515 bp overlap
ChIP DE DE-GATA4-2 515 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 309 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 515 bp overlap
ChIP DE DE-GATA6-2 515 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 336 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 274 bp overlap
HOXB13 2 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 181 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 86 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 179 bp overlap
NR2C2 1 dataset
Motif DE_48h DE_48h-NR2C2_MA0504.2 14 bp overlap
NR2F1 2 datasets
Motif DE_48h DE_48h-NR2F1_MA0017.3 12 bp overlap
Motif DE_48h DE_48h-NR2F1_MA1537.2 13 bp overlap
Nr2f6 1 dataset
Motif DE_48h DE_48h-Nr2f6_MA0677.2 13 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 190 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 128 bp overlap
PPARD 1 dataset
Motif DE_48h DE_48h-PPARD_MA1550.2 14 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 333 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 201 bp overlap
RBPJ 1 dataset
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
RXRB 1 dataset
Motif DE_48h DE_48h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_48h DE_48h-RXRG_MA0856.1 14 bp overlap
Rxra 1 dataset
Motif DE_48h DE_48h-Rxra_MA0512.2 14 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 338 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 156 bp overlap
SMARCA4 3 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 153 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 239 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 133 bp overlap
SMARCC1 1 dataset
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 101 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 346 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 405 bp overlap
Sox6 1 dataset
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 175 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 294 bp overlap
TFAP2C 1 dataset
ChIP WA09 GSE105081.TFAP2C.WA09 141 bp overlap
THRB 1 dataset
Motif DE_48h DE_48h-THRB_MA1574.2 13 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 185 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 152 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE114213.TRPS1.T-47D 223 bp overlap
Zfp809 1 dataset
Motif DE_48h DE_48h-Zfp809_MA2125.1 9 bp overlap