chr3 : 18,428,126 18,428,428
302 bp 27 TFs 1 linked gene
This 302 bp open chromatin element is linked to SATB1 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SATB1 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:18,423,126 – 18,433,428
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
BRD2 2 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 258 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 288 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 226 bp overlap
BRD4 4 datasets
ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 255 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 206 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 302 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 291 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 245 bp overlap
CEBPA 5 datasets
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 75 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 116 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 127 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 81 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 97 bp overlap
CEBPB 3 datasets
ChIP THP-1_NS1-Pam3csk-4h GSE103477.CEBPB.THP-1_NS1-Pam3csk-4h 109 bp overlap
ChIP THP-1_eGFP-Pam3csk-0h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-0h 109 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 193 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 138 bp overlap
CTCF 9 datasets
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 185 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 204 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 133 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 162 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 229 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 302 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 50 bp overlap
ChIP endodermal cell ENCFF471YCZ 286 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 291 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 183 bp overlap
KMT2A 4 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 302 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 302 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 209 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 169 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MEN1 1 dataset
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 302 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 302 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 85 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD4 2 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 83 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 130 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 217 bp overlap
ZNF134 1 dataset
ChIP HEK293 GSE76494.ZNF134.HEK293 120 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 302 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap