chr2 : 210,009,853 210,010,007
154 bp 41 TFs 1 linked gene
This 154 bp open chromatin element is linked to RPE and is bound by 41 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RPE 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:210,004,853 – 210,015,007
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 6 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 154 bp overlap
ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 97 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 154 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 82 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 88 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 116 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 50 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 50 bp overlap
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 118 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 97 bp overlap
ChIP BLaER1 ENCFF364PUR 69 bp overlap
ChIP BLaER1 ENCFF798NMV 97 bp overlap
ChIP BLaER1 ENCFF896HSY 91 bp overlap
ERG 2 datasets
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 145 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 131 bp overlap
ESR1 1 dataset
ChIP MCF-7 GSE148277.ESR1.MCF-7 154 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 148 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 154 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 141 bp overlap
FOXA1 1 dataset
ChIP LS180 GSE140533.FOXA1.LS180 137 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 127 bp overlap
ChIP DE DE-FOXA2-2 91 bp overlap
GATA2 1 dataset
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 81 bp overlap
GATA4 2 datasets
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 117 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 143 bp overlap
GATA6 9 datasets
ChIP AGS GSE51705.GATA6.AGS 154 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 102 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 154 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 146 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 137 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 154 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 146 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 77 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 87 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 117 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 91 bp overlap
HOXB13 3 datasets
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 150 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 154 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 74 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 112 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 130 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCFF326EGX 105 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 91 bp overlap
ChIP MDA-MB-453_DHT GSE45201.MYC.MDA-MB-453_DHT 132 bp overlap
NANOG 1 dataset
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 58 bp overlap
NR3C1 1 dataset
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 121 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 130 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCFF069PHD 103 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 142 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 111 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 54 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 154 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 66 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 109 bp overlap
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 154 bp overlap
TCF7L2 4 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 137 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 149 bp overlap
ChIP MCF-7 ENCFF219LIX 154 bp overlap
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 154 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 63 bp overlap
ZNF488 1 dataset
ChIP HEK293 ENCFF780TIG 79 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 123 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 111 bp overlap
ZNF610 1 dataset
ChIP HEK293 ENCFF778UKJ 143 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 70 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 154 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 109 bp overlap