Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

34 transcription factors

BCL11A 1 dataset

ChIP WA01 ENCSR000BIP.BCL11A.WA01 139 bp overlap

BCOR 2 datasets

ChIP WA01 GSE104690.BCOR.WA01 200 bp overlap

ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 201 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 146 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 238 bp overlap

FOXA2 3 datasets

ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 136 bp overlap

ChIP DE DE-FOXA2-1 149 bp overlap

ChIP DE DE-FOXA2-2 242 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 124 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 158 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 187 bp overlap

ChIP DE DE-GATA6-2 187 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 246 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 238 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 257 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 257 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 243 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 257 bp overlap

HDAC2 2 datasets

ChIP H1 ENCFF939VKA 227 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 149 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 257 bp overlap

KMT2A 2 datasets

ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 257 bp overlap

ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 223 bp overlap

MAX 1 dataset

ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 81 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 251 bp overlap

NANOG 11 datasets

ChIP GM23338 ENCFF065NZG 257 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 175 bp overlap

ChIP H1 ENCFF747ZPQ 219 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 257 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 257 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 211 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 257 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 257 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 257 bp overlap

ChIP hESC GSE18292.NANOG.hESC 246 bp overlap

ChIP hESC GSE20650.NANOG.hESC 237 bp overlap

NUTM1 1 dataset

ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 257 bp overlap

POLR2A 1 dataset

ChIP thyroid gland ENCFF979LRR 257 bp overlap

POU5F1 10 datasets

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 257 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 257 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 257 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 150 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 257 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 237 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 257 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 257 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 229 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 194 bp overlap

SMARCA4 4 datasets

ChIP WA09 GSE105028.SMARCA4.WA09 221 bp overlap

ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 230 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 257 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 257 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 251 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 257 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 257 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 257 bp overlap

SMC3 1 dataset

ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 252 bp overlap

SOX12 1 dataset

Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap

SOX14 1 dataset

Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 230 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 257 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 189 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 212 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 187 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap

Vdr 1 dataset

Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap

Gene	Dist. to TSS	Distance	Link type
ENSG00000229337	7.9 kb	Proximal	Proximity
MIR4444-1	8.0 kb	Proximal	Proximity
HNRNPA3	8.1 kb	Proximal	Proximity

Genome Browser