Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

32 transcription factors

BCOR 2 datasets

ChIP WA01 GSE104690.BCOR.WA01 419 bp overlap

ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 384 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 297 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 254 bp overlap

CTCF 12 datasets

ChIP A-673 ENCSR611JJS.CTCF.A-673 205 bp overlap

ChIP A673 ENCFF123WOM 297 bp overlap

ChIP H1 ENCFF764RHO 181 bp overlap

ChIP H9 ENCFF152GTF 282 bp overlap

ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 90 bp overlap

ChIP Loucy ENCSR464DKE.CTCF.Loucy 83 bp overlap

ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 122 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 141 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 146 bp overlap

ChIP endodermal cell ENCFF471YCZ 116 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 169 bp overlap

ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 154 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF896HSY 102 bp overlap

EP300 1 dataset

ChIP H1 ENCFF927IYK 297 bp overlap

ESR1 1 dataset

ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 226 bp overlap

EZH2 2 datasets

ChIP THP-1 GSE135024.EZH2.THP-1 201 bp overlap

ChIP WA01 ENCSR000ASY.EZH2.WA01 359 bp overlap

JUND 4 datasets

ChIP H1 ENCFF010YXS 278 bp overlap

ChIP H1 ENCFF468JZD 231 bp overlap

ChIP WA01 ENCSR000EBZ.JUND.WA01 166 bp overlap

ChIP WA01 ENCSR000BKP.JUND.WA01 169 bp overlap

MED1 1 dataset

ChIP LNCaP_Veh GSE125245.MED1.LNCaP_Veh 128 bp overlap

MEIS1 2 datasets

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

NANOG 11 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 359 bp overlap

ChIP H1 ENCFF747ZPQ 241 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 513 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 513 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 293 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 513 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 513 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 293 bp overlap

ChIP hESC GSE20650.NANOG.hESC 418 bp overlap

ChIP hESC GSE18292.NANOG.hESC 206 bp overlap

OSR1 1 dataset

Motif ES_0h ES_0h-OSR1_MA1542.2 8 bp overlap

OSR2 1 dataset

Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap

PAX3-FOXO1 1 dataset

ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 176 bp overlap

POLR2A 1 dataset

ChIP GM23338 ENCFF450WCS 432 bp overlap

POU5F1 5 datasets

ChIP GM23338 ENCFF333SNB 311 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 495 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 235 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 183 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 199 bp overlap

RNF2 1 dataset

ChIP WA09 GSE105028.RNF2.WA09 238 bp overlap

RUNX2 1 dataset

ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 309 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap

SMAD3 1 dataset

ChIP hESC GSE29422.SMAD3.hESC 211 bp overlap

SMARCA4 1 dataset

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 386 bp overlap

SMARCC1 3 datasets

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 408 bp overlap

ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 130 bp overlap

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 306 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 398 bp overlap

SP1 2 datasets

ChIP H1 ENCFF263FUH 321 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 165 bp overlap

SS18 2 datasets

ChIP Aska-SS GSE108025.SS18.Aska-SS 470 bp overlap

ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 411 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 251 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 159 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 267 bp overlap

TEAD4 2 datasets

ChIP ESC S26-ESC-d0-TEAD4-exp1 238 bp overlap

ChIP H1 ENCFF778PAX 245 bp overlap

TP53 1 dataset

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 233 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 135 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 431 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
LINC01116		8.1 kb	Proximal	Proximity
LINC01117		8.3 kb	Proximal	Proximity

Genome Browser