chr2 : 166,764,290 – 166,764,566
276 bp 45 TFs 0 linked genes
This 276 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:166,759,290 – 166,769,566
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1470.2 19 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 174 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 231 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CTCF 43 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 253 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 254 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 163 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 232 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 182 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 217 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 83 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 111 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 107 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 276 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 82 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 188 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 120 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 276 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 194 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 138 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 186 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 229 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 241 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 143 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 162 bp overlap
ChIP PC-3 ENCFF487TUI 276 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 276 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 166 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 276 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 197 bp overlap
ChIP endodermal cell ENCFF471YCZ 219 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 152 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 194 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 127 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 202 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 198 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 261 bp overlap
ChIP neural progenitor cell ENCFF420RBO 276 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 242 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 166 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 276 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 238 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
ESR1 1 dataset
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 209 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 178 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 276 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 276 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 276 bp overlap
NFKB1 2 datasets
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
ChIP L1236 GSE63736.NFKB1.L1236 138 bp overlap
NFKB2 1 dataset
Motif DE_12h DE_12h-NFKB2_MA0778.2 11 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 10 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 276 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 276 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 276 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 202 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 159 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 276 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 276 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 215 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 214 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 5 datasets
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 171 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 114 bp overlap
ChIP K562 ENCFF634XYR 276 bp overlap
RARA::RXRG 1 dataset
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
RXRA 1 dataset
ChIP Hep-G2 ENCSR000BHU.RXRA.Hep-G2 132 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 276 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 276 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 268 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 207 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 276 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 153 bp overlap
SOX13 1 dataset
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
SOX2 4 datasets
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 230 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 178 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 274 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 181 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 189 bp overlap
ChIP HepG2 ENCFF843EBZ 246 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
Stat5a::Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 258 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 196 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 163 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 276 bp overlap
ZNF24 1 dataset
ChIP GM12878 ENCFF688STO 210 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 255 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
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