chr2 : 156,539,223 156,539,675
452 bp 42 TFs 0 linked genes
This 452 bp open chromatin element has no linked target genes and is bound by 42 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:156,534,223 – 156,544,675
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
AR 9 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 146 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 308 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 452 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 368 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 138 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 186 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 279 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 256 bp overlap
ChIP VCaP_siBCOR-EtOH GSE122572.AR.VCaP_siBCOR-EtOH 175 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 452 bp overlap
BCL11A 1 dataset
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 100 bp overlap
BRD4 1 dataset
ChIP VCaP GSE148358.BRD4.VCaP 228 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 128 bp overlap
Dux 1 dataset
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 413 bp overlap
ESR1 22 datasets
ChIP MCF-7 GSE148277.ESR1.MCF-7 452 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 299 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 296 bp overlap
ChIP MCF-7 GSE117492.ESR1.MCF-7 280 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 159 bp overlap
ChIP MCF-7L_t1 GSE108787.ESR1.MCF-7L_t1 251 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 251 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 161 bp overlap
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 178 bp overlap
ChIP MCF-7_E2_45min GSE109820.ESR1.MCF-7_E2_45min 173 bp overlap
ChIP MCF-7_E2_Dex GSE81510.ESR1.MCF-7_E2_Dex 302 bp overlap
ChIP MCF-7_E2_TNF GSE59530.ESR1.MCF-7_E2_TNF 207 bp overlap
ChIP MCF-7_ESR1_wildtype GSE100074.ESR1.MCF-7_ESR1_wildtype 228 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 260 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 337 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 293 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 210 bp overlap
ChIP MCF-7_SHFOXA1_E2_TNF GSE59530.ESR1.MCF-7_SHFOXA1_E2_TNF 143 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 247 bp overlap
ChIP MCF-7_estradiol-Dex_75min GSE99626.ESR1.MCF-7_estradiol-Dex_75min 128 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 231 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 214 bp overlap
ESR2 2 datasets
Motif DE_60h DE_60h-ESR2_MA0258.2 15 bp overlap
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 278 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 279 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 254 bp overlap
ChIP DE DE-FOXA2-2 404 bp overlap
GATA2 4 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 218 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 184 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 203 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 190 bp overlap
GATA3 3 datasets
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 246 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 313 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 243 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 281 bp overlap
ChIP DE DE-GATA4-1 452 bp overlap
ChIP DE DE-GATA4-2 452 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 417 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 329 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 225 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 11 datasets
ChIP AGS GSE51705.GATA6.AGS 152 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 282 bp overlap
ChIP DE DE-GATA6-1 396 bp overlap
ChIP DE DE-GATA6-2 452 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 298 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 427 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 349 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 330 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 232 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 419 bp overlap
ChIP foregut GSE117136.GATA6.foregut 319 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 102 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 193 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 147 bp overlap
MGA 1 dataset
ChIP A-549_empty GSE112188.MGA.A-549_empty 180 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 61 bp overlap
NR2C1 1 dataset
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
NR3C1 3 datasets
ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.NR3C1.HeLa-B2_P65KD_TA_TNFA 94 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 388 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 220 bp overlap
Nr1H2 1 dataset
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 290 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 233 bp overlap
PHOX2B 1 dataset
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 176 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 356 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 279 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 292 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 284 bp overlap
SRY 1 dataset
Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap
TAF1 1 dataset
ChIP liver ENCSR016BMM.TAF1.liver 169 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 164 bp overlap
TBX20 1 dataset
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX5 1 dataset
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 252 bp overlap
Tbx6 1 dataset
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap