chr2 : 147,393,309 – 147,394,339
1,030 bp 50 TFs 0 linked genes
This 1.0 kb open chromatin element has no linked target genes and is bound by 50 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:147,388,309 – 147,399,339
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 170 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 321 bp overlap
BRD4 1 dataset
ChIP COLO-320 GSE73319.BRD4.COLO-320 337 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCFF003PDY 70 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 236 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 389 bp overlap
ESR1 19 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 260 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 170 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 218 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 196 bp overlap
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 207 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 246 bp overlap
ChIP MCF-7_E2+4OHT GSE119702.ESR1.MCF-7_E2+4OHT 154 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 205 bp overlap
ChIP MCF-7_E2_TNF GSE59530.ESR1.MCF-7_E2_TNF 152 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 254 bp overlap
ChIP MCF-7_OHT GSE119702.ESR1.MCF-7_OHT 154 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 279 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 358 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 182 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 236 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 316 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 188 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 252 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 155 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 282 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 168 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 229 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 62 bp overlap
FOXA1 1 dataset
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 171 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 1030 bp overlap
ChIP DE DE-FOXA2-2 1030 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 813 bp overlap
ChIP DE DE-GATA4-2 797 bp overlap
ChIP foregut GSE117136.GATA4.foregut 435 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 382 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 757 bp overlap
ChIP DE DE-GATA6-2 870 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 270 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 595 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 533 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 604 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 755 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 482 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 495 bp overlap
ChIP foregut GSE117136.GATA6.foregut 358 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 59 bp overlap
HOXB13 2 datasets
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 54 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 72 bp overlap
IRF2BP2 1 dataset
ChIP HEK293 GSE124636.IRF2BP2.HEK293 344 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 89 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 86 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 58 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 193 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 170 bp overlap
OVOL3 2 datasets
ChIP HEK293 ENCFF898STB 98 bp overlap
ChIP HEK293 ENCSR768LIO.OVOL3.HEK293 72 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 413 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 207 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 379 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 65 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 205 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 86 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 177 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 169 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 265 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 159 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 246 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 188 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 179 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 93 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 596 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 418 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 306 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 445 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 334 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD4.HGrC1_C134W-TGF_parental 163 bp overlap
SMC1 2 datasets
ChIP HAP1 GSE94992.SMC1.HAP1 383 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 127 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 498 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 586 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 191 bp overlap
TEAD4 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 121 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 80 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 59 bp overlap
ZBTB12 1 dataset
ChIP HEK293 ENCSR543KOA.ZBTB12.HEK293 124 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 138 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 133 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 156 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 242 bp overlap
ZNF213 1 dataset
ChIP HEK293 ENCSR295GRB.ZNF213.HEK293 74 bp overlap
ZNF524 1 dataset
ChIP HEK293 ENCSR418NZA.ZNF524.HEK293 187 bp overlap
ZNF577 1 dataset
ChIP HEK293 ENCSR776MDR.ZNF577.HEK293 64 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 194 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 285 bp overlap
ZNF610 1 dataset
ChIP HEK293 ENCSR691TXI.ZNF610.HEK293 406 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 88 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 165 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 237 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 122 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 244 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 195 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 200 bp overlap
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