chr1 : 4,659,022 – 4,659,187
165 bp 36 TFs 1 linked gene
This 165 bp open chromatin element is linked to AJAP1 and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
AJAP1 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:4,654,022 – 4,664,187
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 94 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 165 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 165 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 118 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 165 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 144 bp overlap
CTCF 8 datasets
ChIP H9 ENCFF152GTF 73 bp overlap
ChIP brain ENCFF067KUH 107 bp overlap
ChIP brain ENCFF685VRG 165 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 53 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 165 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 61 bp overlap
ChIP neural progenitor cell ENCFF581WPG 94 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 85 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 165 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 165 bp overlap
ESR1 23 datasets
ChIP MCF-7 GSE103023.ESR1.MCF-7 165 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 94 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 126 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 77 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 50 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 58 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 122 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 58 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 111 bp overlap
ChIP MCF-7_GDC-0927 GSE117941.ESR1.MCF-7_GDC-0927 150 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 93 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 147 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 142 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 165 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 50 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 165 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 165 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 165 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 146 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 161 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 51 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 165 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 158 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 110 bp overlap
EZH2 3 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 84 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 67 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 120 bp overlap
FOXA1 17 datasets
ChIP MCF-7 GSE72249.FOXA1.MCF-7 165 bp overlap
ChIP MCF-7 GSE95302.FOXA1.MCF-7 149 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 85 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 165 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 165 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 162 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 125 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 108 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 165 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 162 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 152 bp overlap
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 164 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 165 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 165 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 84 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 138 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 165 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 165 bp overlap
ChIP DE DE-FOXA2-2 165 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 125 bp overlap
GATA3 5 datasets
ChIP MCF-7 GSE122847.GATA3.MCF-7 165 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 163 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 86 bp overlap
ChIP MCF-7_DMSO GSE29073.GATA3.MCF-7_DMSO 86 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 109 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 165 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 120 bp overlap
MAX 2 datasets
ChIP NCI-H128 GSE41105.MAX.NCI-H128 165 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 53 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 138 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 141 bp overlap
NR3C1 1 dataset
ChIP MCF-7_DEX GSE72249.NR3C1.MCF-7_DEX 51 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 111 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 165 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 165 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 165 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 139 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 78 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 142 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 86 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 75 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 105 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 165 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 165 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 61 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 92 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 165 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 156 bp overlap
SS18 3 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 165 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 165 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 165 bp overlap
STAT3 5 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 165 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 165 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 165 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 165 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 131 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 88 bp overlap
TCF7L2 2 datasets
ChIP MCF-7 ENCFF219LIX 165 bp overlap
ChIP MCF-7 ENCSR000EWT.TCF7L2.MCF-7 105 bp overlap
TFAP2C 3 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 69 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 70 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 94 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF265CEM 162 bp overlap
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