chr2 : 117,514,309 117,514,826
517 bp 40 TFs 0 linked genes
This 517 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:117,509,309 – 117,519,826
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
BATF3 1 dataset
ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 364 bp overlap
CDX2 1 dataset
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 89 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 333 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 517 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 216 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 451 bp overlap
ChIP neural cell ENCFF442QNK 213 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 517 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 397 bp overlap
FOSL2 2 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 301 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 419 bp overlap
FOXA1 1 dataset
ChIP LS180 GSE140533.FOXA1.LS180 63 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 241 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 376 bp overlap
GATA6 7 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 160 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 517 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 517 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 517 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 496 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 517 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 517 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 301 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 178 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 177 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 202 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 517 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 513 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 517 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 517 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 517 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 517 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 227 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 450 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 334 bp overlap
NIPBL 1 dataset
ChIP GP5D_SIRAD21 GSE51234.NIPBL.GP5D_SIRAD21 190 bp overlap
NR2F1 1 dataset
ChIP HepG2 ENCFF518ZRY 221 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 385 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 153 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 135 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 260 bp overlap
REST 2 datasets
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 62 bp overlap
ChIP neural ENCSR000BTV.REST.neural 143 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 140 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 517 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 517 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 517 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 512 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 517 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 267 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 517 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 153 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 251 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 215 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 311 bp overlap
SMARCA4 2 datasets
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 366 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 372 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 328 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 517 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 386 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 360 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 503 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 202 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 259 bp overlap
TCF7 2 datasets
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 199 bp overlap
ChIP HepG2 ENCFF628OFQ 233 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 315 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 469 bp overlap