chr2 : 105,150,096 – 105,150,936
840 bp 55 TFs 1 linked gene
This 840 bp open chromatin element is linked to LINC01918 and is bound by 55 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01918 6.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:105,145,096 – 105,155,936
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
AR 8 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 140 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 204 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 163 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 156 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 242 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 294 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 305 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 260 bp overlap
Ar 1 dataset
Motif DE_36h DE_36h-Ar_MA0007.4 16 bp overlap
BRD4 1 dataset
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 341 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 218 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 318 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
EZH2 2 datasets
ChIP PC-9 ENCSR793USK.EZH2.PC-9 178 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 67 bp overlap
Elf5 1 dataset
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 64 bp overlap
ChIP DE DE-FOXA2-1 440 bp overlap
ChIP DE DE-FOXA2-2 425 bp overlap
FOXO1::ELF1 3 datasets
Motif DE_36h DE_36h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_48h DE_48h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 3 datasets
Motif DE_36h DE_36h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_48h DE_48h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::FLI1 3 datasets
Motif DE_36h DE_36h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif DE_48h DE_48h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1FLI1_MA1956.2 13 bp overlap
Foxq1 3 datasets
Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
GATA2 4 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 215 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 525 bp overlap
ChIP DE DE-GATA4-2 535 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 310 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 700 bp overlap
ChIP DE DE-GATA6-2 561 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 524 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 494 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 551 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 523 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 719 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 672 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 478 bp overlap
GRHL2 3 datasets
Motif DE_36h DE_36h-GRHL2_MA1105.3 8 bp overlap
Motif DE_48h DE_48h-GRHL2_MA1105.3 8 bp overlap
Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap
Gata3 4 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 226 bp overlap
HOXA4 2 datasets
Motif DE_36h DE_36h-HOXA4_MA1496.2 7 bp overlap
Motif DE_48h DE_48h-HOXA4_MA1496.2 7 bp overlap
HOXB4 2 datasets
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 255 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 349 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 179 bp overlap
MEF2A 3 datasets
Motif DE_36h DE_36h-MEF2A_MA0052.5 10 bp overlap
Motif DE_48h DE_48h-MEF2A_MA0052.5 10 bp overlap
Motif DE_60h DE_60h-MEF2A_MA0052.5 10 bp overlap
MEF2C 3 datasets
Motif DE_36h DE_36h-MEF2C_MA0497.2 11 bp overlap
Motif DE_48h DE_48h-MEF2C_MA0497.2 11 bp overlap
Motif DE_60h DE_60h-MEF2C_MA0497.2 11 bp overlap
MGA::EVX1 1 dataset
Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 245 bp overlap
NFIB 4 datasets
ChIP MCF-7 ENCFF799WGQ 296 bp overlap
ChIP MCF-7 ENCFF925CGH 297 bp overlap
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 409 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 400 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 358 bp overlap
ChIP K562 ENCFF167YID 329 bp overlap
NFIX 2 datasets
ChIP K-562 ENCSR574VJG.NFIX.K-562 257 bp overlap
ChIP K562 ENCFF382SJS 301 bp overlap
POU6F1 2 datasets
Motif DE_36h DE_36h-POU6F1_MA1549.2 7 bp overlap
Motif DE_48h DE_48h-POU6F1_MA1549.2 7 bp overlap
Prdm5 4 datasets
Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap
Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
RORB 3 datasets
Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap
Motif DE_48h DE_48h-RORB_MA1150.2 10 bp overlap
Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap
RORC 3 datasets
Motif DE_36h DE_36h-RORC_MA1151.2 10 bp overlap
Motif DE_48h DE_48h-RORC_MA1151.2 10 bp overlap
Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 472 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 361 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 382 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 419 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 443 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 339 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 416 bp overlap
SOX21 3 datasets
Motif DE_36h DE_36h-SOX21_MA0866.1 15 bp overlap
Motif DE_48h DE_48h-SOX21_MA0866.1 15 bp overlap
Motif DE_60h DE_60h-SOX21_MA0866.1 15 bp overlap
SPDEF 3 datasets
Motif DE_36h DE_36h-SPDEF_MA0686.2 10 bp overlap
Motif DE_48h DE_48h-SPDEF_MA0686.2 10 bp overlap
Motif DE_60h DE_60h-SPDEF_MA0686.2 10 bp overlap
SPIC 1 dataset
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Sox1 3 datasets
Motif DE_36h DE_36h-Sox1_MA0870.1 15 bp overlap
Motif DE_48h DE_48h-Sox1_MA0870.1 15 bp overlap
Motif DE_60h DE_60h-Sox1_MA0870.1 15 bp overlap
Stat2 1 dataset
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 242 bp overlap
TEAD2 1 dataset
Motif DE_60h DE_60h-TEAD2_MA1121.2 7 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 217 bp overlap
TRPS1 4 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZNF707 1 dataset
Motif DE_36h DE_36h-ZNF707_MA1715.1 15 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 101 bp overlap
ZNF93 1 dataset
Motif DE_36h DE_36h-ZNF93_MA1721.2 14 bp overlap
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