chr2 : 100,684,972 – 100,685,754

782 bp 57 TFs 0 linked genes

This 782 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

57 transcription factors

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

Dmbx1 1 dataset

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

ERF::FOXI1 1 dataset

Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap

ERF::SREBF2 2 datasets

Motif DE_48h DE_48h-ERFSREBF2_MA1939.2 16 bp overlap

Motif DE_60h DE_60h-ERFSREBF2_MA1939.2 16 bp overlap

ETV2::FIGLA 2 datasets

Motif DE_48h DE_48h-ETV2FIGLA_MA1941.2 13 bp overlap

Motif DE_60h DE_60h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV5::FIGLA 2 datasets

Motif DE_48h DE_48h-ETV5FIGLA_MA1945.2 14 bp overlap

Motif DE_60h DE_60h-ETV5FIGLA_MA1945.2 14 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 281 bp overlap

ChIP DE DE-FOXA2-2 411 bp overlap

FOXO1::ELK1 2 datasets

Motif DE_48h DE_48h-FOXO1ELK1_MA1954.2 13 bp overlap

Motif DE_60h DE_60h-FOXO1ELK1_MA1954.2 13 bp overlap

GATA2 2 datasets

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 639 bp overlap

ChIP DE DE-GATA4-2 655 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA5 2 datasets

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 673 bp overlap

ChIP DE DE-GATA6-2 612 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 590 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 516 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 546 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 649 bp overlap

GCM1 1 dataset

Motif DE_60h DE_60h-GCM1_MA0646.2 10 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

Gata3 2 datasets

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HAND2 2 datasets

Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

IKZF1 3 datasets

Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap

Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap

IKZF2 3 datasets

Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

MYB 2 datasets

Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap

Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap

MYOD1 2 datasets

Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap

Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap

NEUROD1 2 datasets

Motif DE_48h DE_48h-NEUROD1_MA1109.2 8 bp overlap

Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 2 datasets

Motif DE_48h DE_48h-NEUROG2_MA0669.1 10 bp overlap

Motif DE_60h DE_60h-NEUROG2_MA0669.1 10 bp overlap

Neurod2 2 datasets

Motif DE_48h DE_48h-Neurod2_MA0668.3 8 bp overlap

Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

Ptf1A 2 datasets

Motif DE_48h DE_48h-Ptf1A_MA1618.2 9 bp overlap

Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap

REL 1 dataset

Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap

RELA 1 dataset

Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

RREB1 1 dataset

Motif DE_60h DE_60h-RREB1_MA0073.2 19 bp overlap

Rhox11 1 dataset

Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 508 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 556 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 495 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 400 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 432 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 256 bp overlap

SPIB 3 datasets

Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap

Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap

SPIC 3 datasets

Motif DE_48h DE_48h-SPIC_MA0687.2 13 bp overlap

Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap

Spi1 3 datasets

Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap

Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap

TEAD1 1 dataset

Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap

TEAD2 1 dataset

Motif DE_60h DE_60h-TEAD2_MA1121.2 7 bp overlap

TEAD3 1 dataset

Motif DE_60h DE_60h-TEAD3_MA0808.1 8 bp overlap

TEAD4 1 dataset

Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap

TFAP2B 1 dataset

Motif DE_60h DE_60h-TFAP2B_MA0811.2 11 bp overlap

TFAP2C 1 dataset

Motif DE_60h DE_60h-TFAP2C_MA0524.3 11 bp overlap

TFAP4::ETV1 2 datasets

Motif DE_48h DE_48h-TFAP4ETV1_MA1966.2 13 bp overlap

Motif DE_60h DE_60h-TFAP4ETV1_MA1966.2 13 bp overlap

TRPS1 2 datasets

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

ZBTB6 1 dataset

Motif DE_60h DE_60h-ZBTB6_MA1581.2 9 bp overlap

ZNF211 1 dataset

Motif DE_60h DE_60h-ZNF211_MA1974.2 10 bp overlap

ZNF416 1 dataset

Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap

ZNF449 1 dataset

Motif DE_60h DE_60h-ZNF449_MA1656.2 10 bp overlap

ZNF528 1 dataset

Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap

ZNF582 1 dataset

Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap