chr2 : 73,707,107 73,707,579
472 bp 38 TFs 5 linked genes
This 472 bp open chromatin element is linked to 5 target genes and is bound by 38 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
TPRKB 30.1 kb Distal Multiome
DUSP11 72.8 kb Distal Multiome
STAMBP 121.7 kb Distal Multiome
DGUOK 219.6 kb Distal Multiome
TET3 277.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:73,702,107 – 73,712,579
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
ATF6 1 dataset
Motif DE_36h DE_36h-ATF6_MA1466.2 13 bp overlap
BAP1 1 dataset
ChIP UM-RC-6 GSE101987.BAP1.UM-RC-6 364 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 274 bp overlap
ChIP K562 ENCFF673OEZ 349 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 248 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 107 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 423 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 170 bp overlap
EZH2 2 datasets
ChIP T98G GSE112240.EZH2.T98G 207 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 149 bp overlap
Ebf4 1 dataset
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 429 bp overlap
ChIP DE DE-FOXA2-2 472 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 195 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 393 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 257 bp overlap
GATA2 2 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 269 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 138 bp overlap
GATA4 7 datasets
ChIP A-549 GSE85002.GATA4.A-549 186 bp overlap
ChIP DE DE-GATA4-1 472 bp overlap
ChIP DE DE-GATA4-2 472 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 398 bp overlap
ChIP foregut GSE117136.GATA4.foregut 466 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 472 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 329 bp overlap
GATA5 1 dataset
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 191 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 181 bp overlap
ChIP DE DE-GATA6-1 472 bp overlap
ChIP DE DE-GATA6-2 472 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 472 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 472 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 472 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 472 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 472 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 472 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 472 bp overlap
ChIP foregut GSE117136.GATA6.foregut 438 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 472 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 309 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 246 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 281 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 152 bp overlap
MEIS2 1 dataset
Motif DE_36h DE_36h-MEIS2_MA1640.2 9 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 145 bp overlap
NR2C2 1 dataset
Motif DE_36h DE_36h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif DE_36h DE_36h-NR2F1_MA1537.2 13 bp overlap
Nr2f6 1 dataset
Motif DE_36h DE_36h-Nr2f6_MA0677.2 13 bp overlap
PPARD 1 dataset
Motif DE_36h DE_36h-PPARD_MA1550.2 14 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 472 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 292 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 472 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 321 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 190 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 370 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 284 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 424 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
STAT3 1 dataset
ChIP monocyte_resting GSE120943.STAT3.monocyte_resting 128 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 176 bp overlap
THAP1 1 dataset
Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap
ZBTB24 2 datasets
Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap
Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap