chr2 : 65,434,642 65,434,812
170 bp 34 TFs 2 linked genes
This 170 bp open chromatin element is linked to LINC02934 and SPRED2 and is bound by 34 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LINC02934 1.9 kb Proximal Proximity
SPRED2 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:65,429,642 – 65,439,812
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 170 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 170 bp overlap
EHMT2 2 datasets
ChIP HepG2 ENCFF004KYI 170 bp overlap
ChIP HepG2 ENCFF004KYI 170 bp overlap
GATA2 1 dataset
ChIP HepG2 ENCFF905PYM 170 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 170 bp overlap
ChIP DE DE-GATA4-2 170 bp overlap
ChIP foregut GSE117136.GATA4.foregut 170 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 147 bp overlap
ChIP DE DE-GATA6-2 170 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 170 bp overlap
ChIP foregut GSE117136.GATA6.foregut 122 bp overlap
HDAC2 1 dataset
ChIP HepG2 ENCFF990GUQ 170 bp overlap
HIC2 1 dataset
ChIP HepG2 ENCFF927POV 51 bp overlap
HMGXB4 1 dataset
ChIP HepG2 ENCFF179TAD 129 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 53 bp overlap
MEF2A 1 dataset
ChIP HepG2 ENCFF614TXG 80 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 111 bp overlap
MNT 1 dataset
ChIP MCF-7 ENCFF144ZFZ 170 bp overlap
MYC 1 dataset
ChIP HepG2 ENCFF575FXK 170 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 170 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 142 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 102 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 105 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 170 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 150 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 147 bp overlap
REST 32 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 170 bp overlap
ChIP A549 ENCFF148AIS 170 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 115 bp overlap
ChIP H1 ENCFF429RUE 153 bp overlap
ChIP HEK293 ENCFF073DOT 170 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 169 bp overlap
ChIP HL-60 ENCFF589LOF 170 bp overlap
ChIP HeLa-S3 ENCFF911DTC 170 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 155 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 170 bp overlap
ChIP HepG2 ENCFF122AWR 170 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 170 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 134 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 103 bp overlap
ChIP K562 ENCFF758CZL 170 bp overlap
ChIP MCF-7 ENCFF893RRD 170 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 122 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 143 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 52 bp overlap
ChIP PFSK-1 ENCFF845VHA 156 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 103 bp overlap
ChIP Panc1 ENCFF518EEQ 170 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 170 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 170 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 96 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 145 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 170 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 170 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 170 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 121 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 127 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 97 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 144 bp overlap
SMARCA4 2 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 84 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 133 bp overlap
SMARCC1 1 dataset
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 57 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 170 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 130 bp overlap
TBX5 2 datasets
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 152 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 152 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 157 bp overlap
ZEB1 2 datasets
ChIP HepG2 ENCFF808RQT 170 bp overlap
ChIP RKO GSE88734.ZEB1.RKO 54 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 81 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 119 bp overlap
ZFX 1 dataset
ChIP HCT116 ENCFF324IZY 170 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 165 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 71 bp overlap
ZNF547 1 dataset
ChIP HepG2 ENCFF834XWI 170 bp overlap
ZNF598 1 dataset
ChIP HepG2 ENCFF356UIO 170 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 170 bp overlap