chrX : 149,120,493 149,120,732
239 bp 42 TFs 0 linked genes
This 239 bp open chromatin element has no linked target genes and is bound by 42 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:149,115,493 – 149,125,732
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP Jurkat GSE97512.ARID5B.Jurkat 150 bp overlap
BRD4 1 dataset
ChIP Jurkat GSE83777.BRD4.Jurkat 186 bp overlap
CTCF 14 datasets
ChIP CUTLL1_GSI GSE130140.CTCF.CUTLL1_GSI 176 bp overlap
ChIP DND-41 ENCFF913MRA 151 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 239 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 127 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 112 bp overlap
ChIP GM12878 ENCFF635MMB 161 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 128 bp overlap
ChIP Kasumi-1_siRE GSE121280.CTCF.Kasumi-1_siRE 113 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 186 bp overlap
ChIP endodermal cell ENCFF471YCZ 223 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 186 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 191 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 148 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 194 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 144 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 95 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 203 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 232 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 231 bp overlap
FLI1 2 datasets
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 106 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 146 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 110 bp overlap
GATA3 5 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 233 bp overlap
ChIP Jurkat GSE29180.GATA3.Jurkat 212 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 186 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 114 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 107 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 239 bp overlap
ChIP GM12878 ENCFF824TGK 239 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 124 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 140 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 146 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 118 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 239 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 239 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 131 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 55 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 211 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 100 bp overlap
PKNOX1 3 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCFF589FCY 212 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 239 bp overlap
RAD21 4 datasets
ChIP GM12878 ENCFF101UQZ 148 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 127 bp overlap
ChIP GM12878 ENCSR000EAC.RAD21.GM12878 123 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 97 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE76181.RUNX1.Jurkat 239 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 239 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 208 bp overlap
RUNX2 1 dataset
ChIP PER-117 GSE151819.RUNX2.PER-117 239 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 136 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 99 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 172 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 239 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 239 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 236 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 187 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 194 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 222 bp overlap
SPI1 3 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 194 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 216 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 190 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 239 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 167 bp overlap
YY1 1 dataset
ChIP HEK293T_control GSE128106.YY1.HEK293T_control 187 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 99 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap