chrX : 47,574,878 – 47,575,160
282 bp 44 TFs 1 linked gene
This 282 bp open chromatin element is linked to TIMP1 and is bound by 44 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TIMP1 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:47,569,878 – 47,580,160
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 140 bp overlap
BCL11A 8 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 149 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 55 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 57 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 114 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 58 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 98 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 125 bp overlap
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 142 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 151 bp overlap
BRD2 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 160 bp overlap
BRD4 2 datasets
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 66 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 53 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 229 bp overlap
ChIP K562 ENCFF963TXY 282 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 282 bp overlap
ChIP K562 ENCFF673OEZ 220 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 172 bp overlap
CREBBP_M768 1 dataset
ChIP NCI-H3396_E2 GSE32349.CREBBP_M768.NCI-H3396_E2 79 bp overlap
Cebpa 15 datasets
ChIP BLaER1 ENCFF031ISE 194 bp overlap
ChIP BLaER1 ENCFF093OYK 211 bp overlap
ChIP BLaER1 ENCFF250ODG 194 bp overlap
ChIP BLaER1 ENCFF262VBH 78 bp overlap
ChIP BLaER1 ENCFF274GAT 207 bp overlap
ChIP BLaER1 ENCFF335XTP 201 bp overlap
ChIP BLaER1 ENCFF341QPD 178 bp overlap
ChIP BLaER1 ENCFF346MCV 68 bp overlap
ChIP BLaER1 ENCFF364PUR 208 bp overlap
ChIP BLaER1 ENCFF399AYC 211 bp overlap
ChIP BLaER1 ENCFF460KDD 190 bp overlap
ChIP BLaER1 ENCFF508JZF 53 bp overlap
ChIP BLaER1 ENCFF798NMV 168 bp overlap
ChIP BLaER1 ENCFF844FIP 121 bp overlap
ChIP BLaER1 ENCFF896HSY 68 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR000BLO.GABPA.K-562 218 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 95 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 124 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 148 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 163 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 225 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 264 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 184 bp overlap
ChIP erythroblast ENCFF867JAR 282 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 282 bp overlap
GATA2 3 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 168 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 131 bp overlap
ChIP K562 ENCFF544PCK 248 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 238 bp overlap
ChIP DE DE-GATA4-2 209 bp overlap
ChIP foregut GSE117136.GATA4.foregut 227 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 245 bp overlap
ChIP DE DE-GATA6-2 212 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 251 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 167 bp overlap
ChIP foregut GSE117136.GATA6.foregut 183 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 59 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 164 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 105 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 241 bp overlap
ChIP HUDEP-2_S4 GSE97671.KLF1.HUDEP-2_S4 237 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 202 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 52 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 61 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 134 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 147 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 282 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 63 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF833NJP 158 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 282 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 282 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 116 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 76 bp overlap
RUNX1 3 datasets
ChIP 697 GSE138031.RUNX1.697 70 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 81 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 54 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 282 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 118 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 126 bp overlap
TAL1 11 datasets
ChIP CD34 GSE52924.TAL1.CD34 207 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 134 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 262 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 175 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 221 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 276 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 245 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 238 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 166 bp overlap
ChIP K562 ENCFF661CCK 273 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 199 bp overlap
TBP 1 dataset
ChIP hESC_8h GSE122298.TBP.hESC_8h 102 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 245 bp overlap
ChIP K562 ENCFF931DJY 282 bp overlap
TCF3 3 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 222 bp overlap
ChIP K562 ENCFF319QZT 282 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 164 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 99 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 93 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 73 bp overlap
ZBTB7A 3 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 282 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 60 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 50 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 245 bp overlap
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