chr21 : 35,259,453 35,259,745
292 bp 50 TFs 0 linked genes
This 292 bp open chromatin element has no linked target genes and is bound by 50 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:35,254,453 – 35,264,745
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
BARX1 1 dataset
Motif DE_72h DE_72h-BARX1_MA0875.2 6 bp overlap
BRD4 1 dataset
ChIP COLO-205 GSE73319.BRD4.COLO-205 179 bp overlap
BSX 1 dataset
Motif DE_72h DE_72h-BSX_MA0876.2 6 bp overlap
CREBBP 1 dataset
ChIP LS180 GSE39277.CREBBP.LS180 90 bp overlap
DLX1 1 dataset
Motif DE_72h DE_72h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_72h DE_72h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_72h DE_72h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_72h DE_72h-Dlx4_MA0881.2 6 bp overlap
ELF3 1 dataset
ChIP PDAC GSE64557.ELF3.PDAC 277 bp overlap
FIGLA 1 dataset
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 218 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 292 bp overlap
ChIP DE DE-GATA4-2 292 bp overlap
ChIP foregut GSE117136.GATA4.foregut 292 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 292 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 292 bp overlap
GATA6 9 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 113 bp overlap
ChIP DE DE-GATA6-1 292 bp overlap
ChIP DE DE-GATA6-2 292 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 292 bp overlap
ChIP foregut GSE117136.GATA6.foregut 292 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 231 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 292 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 292 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 292 bp overlap
GBX2 1 dataset
Motif DE_72h DE_72h-GBX2_MA0890.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HESX1 1 dataset
Motif DE_72h DE_72h-HESX1_MA0894.2 6 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMSO GSE85096.HIF1A.U2OS_trough_DMSO 230 bp overlap
HMBOX1 1 dataset
Motif DE_72h DE_72h-HMBOX1_MA0895.2 7 bp overlap
HNF1A 2 datasets
Motif DE_72h DE_72h-HNF1A_MA0046.3 13 bp overlap
ChIP NY15 GSE108150.HNF1A.NY15 252 bp overlap
HNF1B 4 datasets
Motif DE_72h DE_72h-HNF1B_MA0153.2 13 bp overlap
ChIP H9 ERP004206.HNF1B.H9 253 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 292 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 292 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 122 bp overlap
HOXA7 1 dataset
Motif DE_72h DE_72h-HOXA7_MA1498.3 6 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 292 bp overlap
LBX2 1 dataset
Motif DE_72h DE_72h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_72h DE_72h-LHX2_MA0700.3 6 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA1639.2 9 bp overlap
MSX1 1 dataset
Motif DE_72h DE_72h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_72h DE_72h-MSX2_MA0708.3 6 bp overlap
MYB 1 dataset
Motif DE_72h DE_72h-MYB_MA0100.4 6 bp overlap
Msx3 1 dataset
Motif DE_72h DE_72h-Msx3_MA0709.2 6 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 111 bp overlap
Nobox 1 dataset
Motif DE_72h DE_72h-Nobox_MA0125.2 6 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 127 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 208 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 278 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 266 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 292 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 107 bp overlap
Pax7 1 dataset
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
RAX 1 dataset
Motif DE_72h DE_72h-RAX_MA0718.2 6 bp overlap
REST 3 datasets
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 254 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 292 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 223 bp overlap
RORB 1 dataset
Motif DE_72h DE_72h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_72h DE_72h-RORC_MA1151.2 10 bp overlap
Rhox11 1 dataset
Motif DE_72h DE_72h-Rhox11_MA0629.2 9 bp overlap
SIX1 1 dataset
Motif DE_72h DE_72h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 292 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 165 bp overlap
ZEB1 1 dataset
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZNF652 1 dataset
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap
ZNF667 1 dataset
Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap
ZNF680 1 dataset
Motif DE_72h DE_72h-ZNF680_MA1729.2 11 bp overlap
ZSCAN31 1 dataset
Motif DE_72h DE_72h-ZSCAN31_MA1722.2 18 bp overlap