chr20 : 51,211,837 51,212,205
368 bp 39 TFs 0 linked genes
This 368 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:51,206,837 – 51,217,205
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 119 bp overlap
BRD3 1 dataset
ChIP MM1-S GSE43743.BRD3.MM1-S 222 bp overlap
BRD4 5 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 320 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 194 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 224 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 310 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 141 bp overlap
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 165 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 157 bp overlap
CTCF 3 datasets
ChIP endodermal cell ENCFF471YCZ 247 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 87 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 213 bp overlap
E4F1 1 dataset
ChIP GM12878 ENCSR439WAF.E4F1.GM12878 140 bp overlap
ESR1 1 dataset
ChIP MCF-7 GSE68356.ESR1.MCF-7 243 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 126 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 263 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 368 bp overlap
FOXA1 4 datasets
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 293 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 196 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 228 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 312 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 368 bp overlap
ChIP DE DE-FOXA2-2 368 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 319 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 331 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 368 bp overlap
ChIP DE DE-GATA4-2 368 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 368 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 368 bp overlap
ChIP DE DE-GATA6-2 368 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 222 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 230 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 214 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 107 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 107 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 82 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 268 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 233 bp overlap
MYB 1 dataset
ChIP PF-382 GSE94000.MYB.PF-382 255 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 213 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 193 bp overlap
PRDM4 3 datasets
ChIP HEK293 ENCFF069PHD 356 bp overlap
ChIP HEK293 ENCFF069PHD 194 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 287 bp overlap
RNF2 2 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 182 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 175 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 166 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 71 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 351 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 346 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 341 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 196 bp overlap
STAT3 1 dataset
ChIP BT-474 GSE152203.STAT3.BT-474 258 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 232 bp overlap
TFAP2A 1 dataset
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 167 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 368 bp overlap
TFAP2C 2 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 226 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 199 bp overlap
ZFX 1 dataset
ChIP MCF-7 ENCFF009NAJ 368 bp overlap
ZNF41 1 dataset
ChIP HEK293 GSE76494.ZNF41.HEK293 203 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 167 bp overlap