chr20 : 8,376,684 – 8,377,642

958 bp 52 TFs 0 linked genes

This 958 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

52 transcription factors

BRD3 1 dataset

ChIP H-1_DE GSE126661.BRD3.H-1_DE 323 bp overlap

CTCF 1 dataset

ChIP GSC23 GSE139416.CTCF.GSC23 270 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 406 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 333 bp overlap

ChIP hESC GSE26097.EOMES.hESC 166 bp overlap

ESR1 1 dataset

ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 247 bp overlap

ETV5::DRGX 1 dataset

Motif DE_60h DE_60h-ETV5DRGX_MA1944.2 12 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_60h DE_60h-ETV5FIGLA_MA1945.2 14 bp overlap

ETV5::HOXA2 1 dataset

Motif DE_60h DE_60h-ETV5HOXA2_MA1948.2 12 bp overlap

FLI1::DRGX 1 dataset

Motif DE_60h DE_60h-FLI1DRGX_MA1949.2 14 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 62 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 629 bp overlap

ChIP DE DE-FOXA2-2 778 bp overlap

GATA1::TAL1 2 datasets

Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA2 1 dataset

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 734 bp overlap

ChIP DE DE-GATA4-2 893 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 168 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 12 datasets

ChIP DE DE-GATA6-1 810 bp overlap

ChIP DE DE-GATA6-2 807 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 609 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 735 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 705 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 782 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 748 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 744 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 754 bp overlap

ChIP foregut GSE117136.GATA6.foregut 330 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 388 bp overlap

GRHL2 2 datasets

Motif DE_36h DE_36h-GRHL2_MA1105.3 8 bp overlap

Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap

GTF2B 1 dataset

ChIP IMR-90_TERT GSE38303.GTF2B.IMR-90_TERT 140 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 251 bp overlap

NCOA3 1 dataset

ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 128 bp overlap

NRL 2 datasets

Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap

Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap

PROX1 1 dataset

Motif DE_60h DE_60h-PROX1_MA0794.1 12 bp overlap

RBPJ 1 dataset

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 320 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 742 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 640 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 289 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 281 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 432 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 764 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 523 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 158 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 285 bp overlap

SNAI2 3 datasets

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 348 bp overlap

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 198 bp overlap

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 221 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 238 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 265 bp overlap

STAT1 1 dataset

Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap

STAT3 1 dataset

Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap

Stat2 1 dataset

Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap

Stat4 1 dataset

Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap

Stat5b 1 dataset

Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 258 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

ZBTB12 2 datasets

Motif DE_36h DE_36h-ZBTB12_MA1649.2 7 bp overlap

Motif DE_60h DE_60h-ZBTB12_MA1649.2 7 bp overlap

ZIM3 1 dataset

Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap

ZNF157 1 dataset

Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap

ZNF281 1 dataset

Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap

ZNF282 1 dataset

Motif DE_60h DE_60h-ZNF282_MA1154.2 15 bp overlap

ZNF317 1 dataset

Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap

ZNF343 1 dataset

Motif DE_60h DE_60h-ZNF343_MA1711.2 16 bp overlap

ZNF85 2 datasets

Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap

Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap

Zfp809 1 dataset

Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap

Zic1::Zic2 2 datasets

Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 2 datasets

Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap

Zic3 2 datasets

Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap