chr2 : 11,683,582 11,684,007
425 bp 49 TFs 1 linked gene
This 425 bp open chromatin element is linked to ENSG00000228496 and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000228496 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:11,678,582 – 11,689,007
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AR 1 dataset
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 182 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 119 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 191 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 152 bp overlap
CTCF 19 datasets
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 177 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 242 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 252 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 289 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 165 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 335 bp overlap
ChIP endodermal cell ENCFF471YCZ 178 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 111 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 165 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 173 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 425 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 205 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 246 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 75 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 143 bp overlap
ESR1 1 dataset
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 254 bp overlap
ETV1 1 dataset
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
EZH2 2 datasets
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 225 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 196 bp overlap
FOXB1 1 dataset
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXF2 1 dataset
Motif ES_0h ES_0h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif ES_0h ES_0h-FOXG1_MA0613.1 8 bp overlap
FOXK1 1 dataset
Motif ES_0h ES_0h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif ES_0h ES_0h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif ES_0h ES_0h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif ES_0h ES_0h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif ES_0h ES_0h-FOXO6_MA0849.1 7 bp overlap
FOXP3 1 dataset
Motif ES_0h ES_0h-FOXP3_MA0850.1 7 bp overlap
Foxf1 1 dataset
Motif ES_0h ES_0h-Foxf1_MA1606.2 7 bp overlap
Foxo1 1 dataset
Motif ES_0h ES_0h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif ES_0h ES_0h-Foxo3_MA0157.4 7 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 185 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 95 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 167 bp overlap
MAFF 1 dataset
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
Mafb 1 dataset
Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap
NRL 1 dataset
Motif ES_0h ES_0h-NRL_MA0842.3 12 bp overlap
PCBP2 1 dataset
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 113 bp overlap
PGR 1 dataset
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 249 bp overlap
POU5F1 1 dataset
ChIP SKM-1 GSE93706.POU5F1.SKM-1 181 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 115 bp overlap
RXRA 2 datasets
ChIP HepG2 ENCFF763IEA 425 bp overlap
ChIP HepG2 ENCFF763IEA 283 bp overlap
Runx1 1 dataset
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 238 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 425 bp overlap
SPDEF 1 dataset
Motif ES_0h ES_0h-SPDEF_MA0686.2 10 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 420 bp overlap
THRB 1 dataset
Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap
ZNF140 1 dataset
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF189 1 dataset
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF610 1 dataset
Motif ES_0h ES_0h-ZNF610_MA1713.2 10 bp overlap
Zic3 1 dataset
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap