chr17 : 64,470,609 64,471,086
477 bp 39 TFs 5 linked genes
This 477 bp open chromatin element is linked to 5 target genes and is bound by 39 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
POLG2 26.2 kb Distal Multiome
DDX5 34.7 kb Distal Multiome
CEP95 36.1 kb Distal Multiome
SMURF2 191.4 kb Distal Multiome
TEX2 207.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:64,465,609 – 64,476,086
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 174 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 250 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.CEBPA.Kasumi-1_SIRUNX1ETO 166 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 134 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 126 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 285 bp overlap
ETS1 1 dataset
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 195 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 264 bp overlap
ChIP DE DE-GATA4-2 395 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 326 bp overlap
ChIP DE DE-GATA6-2 386 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 390 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 462 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 340 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 426 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 344 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 329 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 364 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 123 bp overlap
MAF 1 dataset
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 195 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 366 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 212 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 415 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 239 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 323 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 338 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 148 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 363 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 216 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 327 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 231 bp overlap
ChIP K562 ENCFF286KMN 345 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 199 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 380 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 426 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 388 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 459 bp overlap
SMAD2 4 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 218 bp overlap
ChIP hESC GSE29422.SMAD2.hESC 150 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 380 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 254 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 477 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 477 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 477 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 196 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 477 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 457 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 477 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 451 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 477 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMARCA4 2 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 193 bp overlap
ChIP G-401_Dox GSE71504.SMARCA4.G-401_Dox 281 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 337 bp overlap
SMARCC1 1 dataset
ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 305 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 251 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 197 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 171 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 316 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5843 GSE126004.STAT3.MCF-7_jc5843 310 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 193 bp overlap
TEAD4 2 datasets
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 219 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 275 bp overlap