chr1 : 241,357,753 241,358,573
820 bp 50 TFs 1 linked gene
This 820 bp open chromatin element is linked to ENSG00000286496 and is bound by 50 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000286496 411 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:241,352,753 – 241,363,573
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 285 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 132 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 133 bp overlap
CBX8 2 datasets
ChIP A-549 ENCSR616MOB.CBX8.A-549 788 bp overlap
ChIP A549 ENCFF656LMW 477 bp overlap
CLOCK 1 dataset
ChIP BA10_2 GSE96659.CLOCK.BA10_2 153 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 337 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 275 bp overlap
ESR1 2 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 206 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 120 bp overlap
EZH2 11 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 820 bp overlap
ChIP A-673 ENCSR179SAO.EZH2.A-673 399 bp overlap
ChIP A-673 ENCSR179SAO.EZH2.A-673 304 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 54 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 545 bp overlap
ChIP SK-N-MC ENCFF434OHW 506 bp overlap
ChIP SK-N-MC ENCFF434OHW 279 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 496 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 223 bp overlap
ChIP neural progenitor cell ENCFF472NFV 117 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 266 bp overlap
FOS 1 dataset
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 214 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 296 bp overlap
FOXA2 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 279 bp overlap
GATA4 3 datasets
ChIP foregut GSE117136.GATA4.foregut 335 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 628 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 573 bp overlap
GATA6 7 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 276 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 526 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 348 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 452 bp overlap
ChIP foregut GSE117136.GATA6.foregut 342 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 516 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 454 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 157 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 303 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 169 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 249 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 685 bp overlap
KDM5B 1 dataset
ChIP SUM185 GSE46055.KDM5B.SUM185 126 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 60 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 233 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PDX1 4 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 381 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 203 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 243 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 265 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 371 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 369 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 152 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 445 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 439 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 134 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 202 bp overlap
REPIN1 2 datasets
ChIP HEK293 ENCFF457XPY 54 bp overlap
ChIP HEK293 ENCSR146NLL.REPIN1.HEK293 170 bp overlap
RNF2 6 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 513 bp overlap
ChIP A549 ENCFF650XYA 343 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 206 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 247 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 455 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 246 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 247 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 521 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 192 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 314 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 420 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 170 bp overlap
SUZ12 3 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 282 bp overlap
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 231 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 254 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 207 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 704 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 441 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 176 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 255 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 146 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 277 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 395 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCFF308WOW 238 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 232 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 554 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 112 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 417 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 332 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 461 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 257 bp overlap