chr15 : 97,482,437 – 97,482,550
113 bp 45 TFs 0 linked genes
This 113 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:97,477,437 – 97,487,550
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 113 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 113 bp overlap
CTCF 41 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 108 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 61 bp overlap
ChIP C4-2B ENCFF821XVN 69 bp overlap
ChIP Caco-2 ENCFF753NZV 66 bp overlap
ChIP H9 ENCFF152GTF 50 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 74 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 113 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 113 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 113 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 95 bp overlap
ChIP NPC GSE115407.CTCF.NPC 113 bp overlap
ChIP PC-3 ENCFF487TUI 58 bp overlap
ChIP RWPE-1 ENCSR303GFI.CTCF.RWPE-1 113 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 113 bp overlap
ChIP RWPE2 ENCFF911IEE 96 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 61 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 113 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 113 bp overlap
ChIP VCaP ENCFF858YQT 65 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 92 bp overlap
ChIP brain ENCFF163BBN 105 bp overlap
ChIP brain ENCFF685VRG 106 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 113 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 70 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 113 bp overlap
ChIP heart left ventricle ENCFF663LEI 74 bp overlap
ChIP heart left ventricle ENCFF769GAB 71 bp overlap
ChIP heart left ventricle ENCFF987PUT 58 bp overlap
ChIP heart right ventricle ENCFF725NNJ 69 bp overlap
ChIP heart right ventricle ENCFF767XJQ 50 bp overlap
ChIP heart right ventricle ENCFF979TCT 67 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 55 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 81 bp overlap
ChIP nephron ENCFF589HXU 68 bp overlap
ChIP nephron ENCFF972IQB 58 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 69 bp overlap
ChIP neural crest cell ENCFF182LWK 53 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 55 bp overlap
ChIP neuron GSE115407.CTCF.neuron 68 bp overlap
ChIP spleen ENCFF065CBS 60 bp overlap
ChIP spleen ENCFF954DQD 57 bp overlap
CUX1 1 dataset
ChIP MCF-7 ENCSR017CEO.CUX1.MCF-7 113 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 113 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 113 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 113 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 113 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 1 dataset
Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 1 dataset
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 1 dataset
Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL1::JUN 1 dataset
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap
FOSL1::JUND 1 dataset
Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
FOSL2::JUN 1 dataset
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 1 dataset
Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap
GATA2 2 datasets
ChIP TSU-1621MT GSE60477.GATA2.TSU-1621MT 69 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 110 bp overlap
GATA4 3 datasets
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 113 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 113 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 52 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 113 bp overlap
HNF1A 1 dataset
Motif DE_12h DE_12h-HNF1A_MA0046.3 13 bp overlap
HNF1B 1 dataset
Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
MBD3 1 dataset
ChIP HEK293T GSE102945.MBD3.HEK293T 63 bp overlap
MEIS1 1 dataset
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 113 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 113 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 113 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 113 bp overlap
PKNOX1 1 dataset
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 113 bp overlap
Pax7 1 dataset
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
RAD21 5 datasets
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 113 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 110 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 113 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 113 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 113 bp overlap
RARA 3 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 91 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 113 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 113 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 62 bp overlap
SMARCA4 4 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 113 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 113 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 58 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 113 bp overlap
SMARCC1 4 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 113 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 113 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 100 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 113 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 113 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SPI1 1 dataset
ChIP U-937 GSE128834.SPI1.U-937 113 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 113 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 113 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 52 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF265CEM 113 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCFF636WIC 113 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
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