chr15 : 91,202,218 91,202,996
778 bp 29 TFs 6 linked genes
This 778 bp open chromatin element is linked to 6 target genes and is bound by 29 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
VPS33B 180.2 kb Distal Multiome
PRC1 208.2 kb Distal Multiome
RCCD1 247.3 kb Distal Multiome
UNC45A 267.4 kb Distal Multiome
HDDC3 270.2 kb Distal Multiome
MAN2A2 300.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:91,197,218 – 91,207,996
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 340 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 270 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 278 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 376 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 382 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 354 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 341 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 271 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 778 bp overlap
ChIP DE DE-FOXA2-2 771 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 778 bp overlap
ChIP DE DE-GATA4-2 778 bp overlap
ChIP foregut GSE117136.GATA4.foregut 285 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 245 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 743 bp overlap
ChIP DE DE-GATA6-2 778 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 407 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 292 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 579 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 258 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 221 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 293 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 246 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 318 bp overlap
NFATC3 1 dataset
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 129 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 220 bp overlap
Nfatc1 1 dataset
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 440 bp overlap
PRDM9 1 dataset
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 153 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 339 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 168 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 586 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 389 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 297 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 142 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 314 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 224 bp overlap
ZNF707 1 dataset
Motif DE_60h DE_60h-ZNF707_MA1715.1 15 bp overlap
ZNF768 1 dataset
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap