chr15 : 65,521,411 65,521,886
475 bp 35 TFs 8 linked genes
This 475 bp open chromatin element is linked to 8 target genes and is bound by 35 transcription factors.
Linked Genes
8 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
DPP8 3.7 kb Proximal Proximity
HACD3 8.6 kb Proximal Proximity
INTS14 89.6 kb Distal Multiome
SLC24A1 89.8 kb Distal Multiome
IGDCC4 98.6 kb Distal Multiome
IGDCC3 143.6 kb Distal Multiome
PARP16 234.7 kb Distal Multiome
DENND4A 270.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:65,516,411 – 65,526,886
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 238 bp overlap
ATF4 1 dataset
ChIP HUDEP-2_KO GSE143961.ATF4.HUDEP-2_KO 252 bp overlap
BCL11A 8 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 99 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 85 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 54 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 57 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 84 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 65 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 89 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 94 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 254 bp overlap
ChIP K562 ENCFF963TXY 362 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 308 bp overlap
ChIP K562 ENCFF673OEZ 157 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 452 bp overlap
CEBPB 2 datasets
ChIP K-562 ENCSR000EHE.CEBPB.K-562 249 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 152 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 107 bp overlap
CTCF 1 dataset
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 142 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 166 bp overlap
ChIP BLaER1 ENCFF364PUR 63 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 327 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 279 bp overlap
ChIP DE DE-FOXA2-1 475 bp overlap
ChIP DE DE-FOXA2-2 475 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 201 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 241 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 206 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 204 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 174 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
ChIP erythroblast ENCFF867JAR 471 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 348 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 208 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 324 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 286 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 220 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 152 bp overlap
GATA4 7 datasets
ChIP A-549 GSE85002.GATA4.A-549 305 bp overlap
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 386 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 211 bp overlap
ChIP DE DE-GATA4-1 475 bp overlap
ChIP DE DE-GATA4-2 475 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 454 bp overlap
ChIP foregut GSE117136.GATA4.foregut 347 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 475 bp overlap
ChIP DE DE-GATA6-2 475 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 281 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 475 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 367 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 446 bp overlap
ChIP foregut GSE117136.GATA6.foregut 319 bp overlap
GFI1B 2 datasets
ChIP SET-2 GSE121424.GFI1B.SET-2 335 bp overlap
ChIP SET-2_GSK_insR GSE121424.GFI1B.SET-2_GSK_insR 265 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 256 bp overlap
KDM1A 1 dataset
ChIP SET-2 GSE121424.KDM1A.SET-2 231 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 253 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 139 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 128 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 369 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 342 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 280 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 252 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 401 bp overlap
STAT1 1 dataset
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 211 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 180 bp overlap
TAL1 9 datasets
ChIP CD34 GSE52924.TAL1.CD34 296 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 253 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 118 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 172 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 263 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 217 bp overlap
ChIP K562 ENCFF620GMX 377 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 233 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 234 bp overlap
ChIP K562 ENCFF931DJY 391 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 154 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 182 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 88 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 105 bp overlap