chr14 : 70,646,773 70,647,010
237 bp 34 TFs 2 linked genes
This 237 bp open chromatin element is linked to TTC9 and TTC9-DT and is bound by 34 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TTC9 4.9 kb Proximal Proximity
TTC9-DT 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:70,641,773 – 70,652,010
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 62 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 200 bp overlap
ELF3 1 dataset
ChIP PDAC GSE64557.ELF3.PDAC 180 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 190 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 230 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 146 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 70 bp overlap
FLI1 4 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 215 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 170 bp overlap
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 128 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 147 bp overlap
FOXA1 1 dataset
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 123 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 184 bp overlap
GATA2 2 datasets
ChIP SKH1 GSE87283.GATA2.SKH1 189 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 237 bp overlap
GATA3 7 datasets
ChIP CCRF-CEM GSE33850.GATA3.CCRF-CEM 94 bp overlap
ChIP CD4_TH2 GSE72266.GATA3.CD4_TH2 177 bp overlap
ChIP Jurkat GSE29180.GATA3.Jurkat 237 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 213 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 174 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 156 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 207 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 237 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 214 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 237 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 237 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 237 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 237 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 140 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 217 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 186 bp overlap
NANOG 5 datasets
ChIP GM23338 ENCFF065NZG 184 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 237 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 199 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 237 bp overlap
ChIP hESC GSE18292.NANOG.hESC 190 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF770YBQ 237 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 237 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 176 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 228 bp overlap
SMARCA4 7 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 232 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 170 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 237 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 106 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 219 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 197 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 237 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 237 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 211 bp overlap
SPI1 6 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 237 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 178 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 235 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 214 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 135 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 195 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 212 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 213 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 194 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 108 bp overlap