chr14 : 45,080,258 45,081,205
947 bp 47 TFs 3 linked genes
This 947 bp open chromatin element is linked to PRPF39-DT, PRPF39, and SNORD58 and is bound by 47 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
PRPF39-DT 2.8 kb Proximal Proximity
PRPF39 2.9 kb Proximal Proximity
SNORD58 7.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:45,075,258 – 45,086,205
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
DRAP1 1 dataset
ChIP HepG2 ENCFF296JHR 81 bp overlap
EGR1 1 dataset
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
EGR3 1 dataset
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
EGR4 1 dataset
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ELF4 1 dataset
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
FOXA2 1 dataset
ChIP HepG2 ENCFF570ABM 109 bp overlap
GATA2 1 dataset
ChIP HepG2 ENCFF905PYM 155 bp overlap
HOMEZ 1 dataset
ChIP HepG2 ENCFF800ZQH 192 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MITF 3 datasets
ChIP 501-mel GSE137522.MITF.501-mel 147 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 145 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 86 bp overlap
NFYA 1 dataset
ChIP HepG2 ENCFF883OMO 125 bp overlap
NFYB 2 datasets
ChIP GM12878 ENCFF474DNH 53 bp overlap
ChIP WTC11 ENCFF751ZTQ 80 bp overlap
NR2F2 1 dataset
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 201 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 194 bp overlap
POLR2A 1 dataset
ChIP HepG2 ENCFF350RIU 60 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 351 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 273 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 193 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 180 bp overlap
SETDB1 1 dataset
ChIP HepG2 ENCFF878HLP 95 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 171 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
ChIP HepG2 ENCFF931FHV 128 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SPDEF 1 dataset
Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 117 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 177 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap