chr13 : 68,234,402 – 68,234,543
141 bp 30 TFs 0 linked genes
This 141 bp open chromatin element has no linked target genes and is bound by 30 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:68,229,402 – 68,239,543
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 141 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 136 bp overlap
BRD4 2 datasets
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 99 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 141 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_JQ1 GSE116879.BRD9.MDA-MB-231_JQ1 141 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 141 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 141 bp overlap
CTCF 216 datasets
ChIP 81-3 ERP002246.CTCF.81-3 99 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 141 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 141 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 102 bp overlap
ChIP A549 ENCFF034FVO 141 bp overlap
ChIP AG04450 ENCFF116DJL 141 bp overlap
ChIP ASC GSE21366.CTCF.ASC 141 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 141 bp overlap
ChIP BE2C ENCFF757SRF 114 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 141 bp overlap
ChIP Caco-2 ENCFF934QYS 141 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 102 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 141 bp overlap
ChIP D721Med ENCFF513FYD 141 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 141 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 141 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 141 bp overlap
ChIP GM10266 ENCFF241YYF 141 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 109 bp overlap
ChIP GM12872 ENCFF697BYI 141 bp overlap
ChIP GM12878 ENCFF485TGR 141 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 141 bp overlap
ChIP GM23338 ENCFF772DML 78 bp overlap
ChIP H1 ENCFF764RHO 141 bp overlap
ChIP H54 ENCFF255TVO 141 bp overlap
ChIP H9 ENCFF152GTF 141 bp overlap
ChIP H9 ENCFF152GTF 83 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 141 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 137 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 141 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 141 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 141 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 141 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 141 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 141 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 141 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 141 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 141 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 141 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 70 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 76 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 138 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 119 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 91 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 87 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 141 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 141 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 141 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 141 bp overlap
ChIP HeLa-S3 ENCFF565UFR 129 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 141 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 141 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 120 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 141 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 141 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 141 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 141 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 141 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 141 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 141 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 141 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 141 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 141 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 141 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 115 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 141 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 141 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 100 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 132 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 132 bp overlap
ChIP MCF 10A ENCFF988BGF 141 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 141 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 141 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 141 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 141 bp overlap
ChIP MCF-7 ENCFF139NQI 141 bp overlap
ChIP MCF-7 ENCFF162GNE 141 bp overlap
ChIP MCF-7 ENCFF198DQX 141 bp overlap
ChIP MCF-7 ENCFF494VXA 141 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 141 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 133 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 141 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 141 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 135 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 126 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 107 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 141 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 141 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 141 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 141 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 141 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 141 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 141 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 112 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 141 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 141 bp overlap
ChIP PC-3 ENCFF487TUI 141 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 141 bp overlap
ChIP Panc1 ENCFF056JQX 141 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 130 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 141 bp overlap
ChIP RWPE2 ENCFF911IEE 141 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 112 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 141 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 141 bp overlap
ChIP SK-N-SH ENCFF575DMG 141 bp overlap
ChIP SK-N-SH ENCFF731NJX 102 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 141 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 141 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 141 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 141 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 141 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 141 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 141 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 141 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 107 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 141 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 139 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 141 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 141 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 141 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 141 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 134 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 141 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 110 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 141 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 141 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 141 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 141 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 135 bp overlap
ChIP adrenal gland ENCFF257AUK 141 bp overlap
ChIP adrenal gland ENCFF596QXB 141 bp overlap
ChIP adrenal-gland ENCSR408ZEE.CTCF.adrenal-gland 141 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 141 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 141 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 141 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 141 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 141 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 141 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 141 bp overlap
ChIP brain ENCFF163BBN 141 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 141 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 141 bp overlap
ChIP chondrocyte ENCFF134ORZ 141 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 141 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 141 bp overlap
ChIP colon_transverse ENCSR608WPS.CTCF.colon_transverse 141 bp overlap
ChIP endodermal cell ENCFF471YCZ 141 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 126 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 141 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 115 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 141 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 141 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 141 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 141 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 141 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 141 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 141 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 141 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 141 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 141 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 141 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 137 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 141 bp overlap
ChIP esophagus muscularis mucosa ENCFF544GAS 141 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 128 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 141 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR353DFU.CTCF.esophagus_muscularis-mucosa 141 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 141 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 141 bp overlap
ChIP fibroblast_DERMAL ENCSR000APM.CTCF.fibroblast_DERMAL 132 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 132 bp overlap
ChIP fibroblast_LUNG ENCSR000DVA.CTCF.fibroblast_LUNG 141 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 105 bp overlap
ChIP gastroesophageal sphincter ENCFF607YRA 141 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 141 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 141 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 141 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 141 bp overlap
ChIP hepatocyte ENCFF263BLJ 141 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 141 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 141 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 121 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 141 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 141 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 141 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 124 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 141 bp overlap
ChIP islet ERP004003.CTCF.islet 141 bp overlap
ChIP keratinocyte ENCFF667ULX 141 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 141 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 141 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 141 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 141 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 141 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 141 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 141 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 130 bp overlap
ChIP nephron ENCFF589HXU 141 bp overlap
ChIP neural progenitor cell ENCFF420RBO 141 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 141 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 141 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 141 bp overlap
ChIP osteocyte ENCFF929FPD 141 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 110 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 141 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 136 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 141 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 141 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 141 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 141 bp overlap
ChIP right lobe of liver ENCFF011NDG 141 bp overlap
ChIP right lobe of liver ENCFF250KSY 141 bp overlap
ChIP right lobe of liver ENCFF956UTA 141 bp overlap
ChIP transverse colon ENCFF653EYS 141 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 141 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 141 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 141 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 141 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 141 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 141 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 141 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 141 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 141 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 141 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 105 bp overlap
KLF1 1 dataset
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 63 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 141 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 141 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 141 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 141 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 141 bp overlap
RAD21 47 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 141 bp overlap
ChIP A549 ENCFF264AHX 141 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 91 bp overlap
ChIP H1 ENCFF698EWO 141 bp overlap
ChIP H1 ENCFF967OJF 141 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 141 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 141 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 141 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 141 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 141 bp overlap
ChIP HCT116 ENCFF568PEO 141 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 101 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 141 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 141 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 141 bp overlap
ChIP HeLa-S3 ENCFF775CHI 86 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 141 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 141 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 128 bp overlap
ChIP Ishikawa ENCFF570JVV 141 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 141 bp overlap
ChIP MCF-7 ENCFF694KOM 141 bp overlap
ChIP MCF-7 ENCFF724VCQ 141 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 141 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 141 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 141 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 141 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 141 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 123 bp overlap
ChIP SK-N-SH ENCFF747MAS 138 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 141 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 141 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 127 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 141 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 141 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 141 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 141 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 131 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.RAD21.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 141 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 141 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 136 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 128 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 108 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 141 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 141 bp overlap
ChIP liver ENCFF485PAC 141 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 141 bp overlap
SMAD1 1 dataset
ChIP CD34_PROG_BMP GSE29194.SMAD1.CD34_PROG_BMP 125 bp overlap
SMARCA4 1 dataset
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 141 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 141 bp overlap
SMC1 2 datasets
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 141 bp overlap
ChIP MCF-10A GSE101921.SMC1.MCF-10A 141 bp overlap
SMC1A 2 datasets
ChIP A-549 GSE76893.SMC1A.A-549 137 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 137 bp overlap
SMC3 6 datasets
ChIP HeLa GSE126990.SMC3.HeLa 141 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 141 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 141 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 141 bp overlap
ChIP SK-N-SH ENCFF791WFB 141 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 141 bp overlap
SOX15 1 dataset
Motif DE_12h DE_12h-SOX15_MA1152.2 7 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 141 bp overlap
STAG1 7 datasets
ChIP HMEC-1 GSE101921.STAG1.HMEC-1 141 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 141 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 141 bp overlap
ChIP MCF-10A GSE101921.STAG1.MCF-10A 141 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 141 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 136 bp overlap
ChIP erythroid GSE67783.STAG1.erythroid 141 bp overlap
STAG2 5 datasets
ChIP HL-60 GSE131577.STAG2.HL-60 105 bp overlap
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 141 bp overlap
ChIP MCF-10A GSE101921.STAG2.MCF-10A 141 bp overlap
ChIP MCF-10A_Control GSE101921.STAG2.MCF-10A_Control 126 bp overlap
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 130 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 89 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 103 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 117 bp overlap
ZKSCAN1 1 dataset
Motif DE_12h DE_12h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF654 2 datasets
ChIP HEK293 ENCFF636WIC 141 bp overlap
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 141 bp overlap
Huangfu Lab · Publications · Resources · Contact