Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

42 transcription factors

CTCF 34 datasets

Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap

Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap

Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap

ChIP GM23338 ENCFF772DML 201 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 182 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 194 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 173 bp overlap

ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 182 bp overlap

ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 204 bp overlap

ChIP MCF-10A GSE98551.CTCF.MCF-10A 192 bp overlap

ChIP MCF-7 ENCFF139NQI 245 bp overlap

ChIP MCF-7 ENCFF162GNE 230 bp overlap

ChIP MCF-7 ENCFF198DQX 209 bp overlap

ChIP MCF-7 ENCFF210JUZ 310 bp overlap

ChIP MCF-7 ENCFF494VXA 217 bp overlap

ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 196 bp overlap

ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 231 bp overlap

ChIP MCF-7 GSE137216.CTCF.MCF-7 231 bp overlap

ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 145 bp overlap

ChIP MCF-7 GSE70764.CTCF.MCF-7 138 bp overlap

ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 121 bp overlap

ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 265 bp overlap

ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 255 bp overlap

ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 192 bp overlap

ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 220 bp overlap

ChIP OCI-LY7 ENCFF086AXQ 395 bp overlap

ChIP PC-3 ENCFF487TUI 375 bp overlap

ChIP PC-3 ENCSR359LOD.CTCF.PC-3 313 bp overlap

ChIP endodermal cell ENCFF471YCZ 331 bp overlap

ChIP neural progenitor cell ENCFF420RBO 298 bp overlap

ChIP neural progenitor cell ENCFF420RBO 411 bp overlap

ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 119 bp overlap

ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 246 bp overlap

ChIP retinal pigment epithelial cell ENCFF810AAG 248 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 181 bp overlap

ESR1 2 datasets

ChIP MCF-7 GSE119057.ESR1.MCF-7 154 bp overlap

ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 169 bp overlap

Ebf2 1 dataset

Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap

FIGLA 2 datasets

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap

GATA1::TAL1 1 dataset

Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap

GATA2 2 datasets

Motif DE_12h DE_12h-GATA2_MA0036.4 7 bp overlap

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 479 bp overlap

ChIP DE DE-GATA4-2 439 bp overlap

Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

GATA5 2 datasets

Motif DE_12h DE_12h-GATA5_MA0766.3 8 bp overlap

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 443 bp overlap

ChIP DE DE-GATA6-2 479 bp overlap

Motif DE_12h DE_12h-GATA6_MA1104.3 8 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 377 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 471 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 484 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 452 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 473 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 505 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 326 bp overlap

Gata3 2 datasets

Motif DE_12h DE_12h-Gata3_MA0037.5 8 bp overlap

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

HAND2 1 dataset

Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap

HOXB4 1 dataset

Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap

HOXD4 1 dataset

Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 396 bp overlap

MEIS1 1 dataset

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

MITF 1 dataset

ChIP 501-mel GSE137522.MITF.501-mel 319 bp overlap

MSC 1 dataset

Motif DE_48h DE_48h-MSC_MA0665.1 10 bp overlap

PAX6 1 dataset

Motif DE_12h DE_12h-PAX6_MA0069.1 14 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_48h DE_48h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAD21 3 datasets

ChIP MCF-7 ENCFF694KOM 280 bp overlap

ChIP MCF-7 GSE72082.RAD21.MCF-7 121 bp overlap

ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 121 bp overlap

RELB 1 dataset

Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 500 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 552 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 552 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 552 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 552 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 552 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 552 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 552 bp overlap

SP4 1 dataset

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

TBX1 1 dataset

Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap

TBX18 1 dataset

Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap

TBX21 1 dataset

Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap

TBX4 1 dataset

Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap

TBX5 1 dataset

Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap

TRPS1 2 datasets

Motif DE_12h DE_12h-TRPS1_MA1970.2 8 bp overlap

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 158 bp overlap

ZEB1 2 datasets

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap

ZNF263 1 dataset

Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap

ZNF675 1 dataset

Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap

ZNF766 2 datasets

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap

Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Genome Browser