chr12 : 102,052,292 – 102,052,486
194 bp 32 TFs 1 linked gene
This 194 bp open chromatin element is linked to WASHC3 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
WASHC3 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:102,047,292 – 102,057,486
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 114 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 109 bp overlap
ARNT 1 dataset
ChIP 501-mel GSE95280.ARNT.501-mel 194 bp overlap
BRD4 5 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 154 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 102 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 194 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 147 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 194 bp overlap
BRF2 1 dataset
ChIP IMR-90_TERT GSE38303.BRF2.IMR-90_TERT 144 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 177 bp overlap
CHD8 2 datasets
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 162 bp overlap
ChIP T-47D_R5020_45 GSE62428.CHD8.T-47D_R5020_45 121 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 103 bp overlap
CTCF 81 datasets
ChIP 22Rv1 ENCFF466OXN 194 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 170 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 130 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 146 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 188 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 139 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 108 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 193 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 182 bp overlap
ChIP GM12873 ENCFF711LOS 194 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 114 bp overlap
ChIP GM12874 ENCFF942MTD 194 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 116 bp overlap
ChIP GM23338 ENCFF772DML 188 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 111 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 194 bp overlap
ChIP H1 ENCFF764RHO 194 bp overlap
ChIP H9 ENCFF152GTF 134 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 188 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 103 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 189 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 194 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 164 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 119 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 194 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 194 bp overlap
ChIP K562 ENCFF111MGE 194 bp overlap
ChIP K562 ENCFF598YSU 194 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 129 bp overlap
ChIP LNCAP ENCFF700QXT 194 bp overlap
ChIP MCF-7 ENCFF139NQI 174 bp overlap
ChIP MCF-7 ENCFF198DQX 194 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 72 bp overlap
ChIP MCF-7 ENCFF494VXA 194 bp overlap
ChIP MCF-7 ENCFF844STM 70 bp overlap
ChIP MCF-7 ENCFF954TUV 194 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 194 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 141 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 169 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 171 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 122 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 194 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 194 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 194 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 194 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 176 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 121 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 156 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 190 bp overlap
ChIP NB4 ENCFF155DNY 194 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 143 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 194 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 194 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 150 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 194 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 194 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 194 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 194 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 194 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 194 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 144 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 177 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 164 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 144 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 131 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 155 bp overlap
ChIP endodermal cell ENCFF471YCZ 155 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 160 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 194 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 166 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 183 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 150 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 109 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 177 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 165 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 187 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 125 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 176 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 168 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 69 bp overlap
ESR1 4 datasets
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 72 bp overlap
ChIP MCF-7 GSE119057.ESR1.MCF-7 152 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 169 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 194 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 67 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 157 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 139 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 194 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 160 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 194 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 86 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 97 bp overlap
HNRNPLL 1 dataset
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 178 bp overlap
MECOM 1 dataset
ChIP SKH1_E2 GSE102697.MECOM.SKH1_E2 138 bp overlap
MED1 3 datasets
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 194 bp overlap
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 77 bp overlap
ChIP VCaP GSE148358.MED1.VCaP 85 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 109 bp overlap
PGR 5 datasets
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 181 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 151 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 127 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 128 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 115 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 140 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 194 bp overlap
RUNX1 1 dataset
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 194 bp overlap
SMC1A 2 datasets
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 144 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 188 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 151 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 121 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 184 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 194 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 194 bp overlap
ZNF579 1 dataset
ChIP MCF-7 ENCSR018MQH.ZNF579.MCF-7 194 bp overlap
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