chr12 : 77,560,590 77,561,013
423 bp 46 TFs 0 linked genes
This 423 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:77,555,590 – 77,566,013
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_7 GSE104399.AR.breast_tumor_Male_7 236 bp overlap
BRD4 1 dataset
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 123 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 258 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap
CTCF 27 datasets
ChIP 22Rv1 ENCFF466OXN 423 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 318 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 120 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 212 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF764RHO 227 bp overlap
ChIP H9 ENCFF152GTF 313 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 180 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 95 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 158 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 217 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 188 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 145 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 109 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 144 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 285 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 277 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 220 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 220 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 114 bp overlap
ChIP endodermal cell ENCFF471YCZ 321 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 132 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 171 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 139 bp overlap
ESR1 3 datasets
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 343 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 179 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 401 bp overlap
EZH2 1 dataset
ChIP LNCaP GSE39459.EZH2.LNCaP 199 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 197 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 244 bp overlap
HDAC2 2 datasets
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 126 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 186 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 267 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 126 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIC 1 dataset
Motif DE_12h DE_12h-NFIC_MA0161.3 7 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 123 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 324 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 201 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 211 bp overlap
ChIP H1 ENCFF967OJF 240 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 131 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 99 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 190 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 159 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 340 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 358 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap