chr12 : 31,895,475 – 31,895,824
349 bp 35 TFs 1 linked gene
This 349 bp open chromatin element is linked to ENSG00000244436 and is bound by 35 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000244436 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:31,890,475 – 31,900,824
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
BRD3 4 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 138 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 264 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD3.MV4-11_IBET151_500nM 243 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 263 bp overlap
BRD4 32 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 51 bp overlap
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 349 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 289 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 74 bp overlap
ChIP DND41 GSE54379.BRD4.DND41 198 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 349 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 349 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 213 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 225 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 234 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 349 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 296 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 349 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 220 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 126 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 58 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 66 bp overlap
ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 349 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 307 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 349 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 284 bp overlap
ChIP MV4-11_IBET151_5000nM GSE120715.BRD4.MV4-11_IBET151_5000nM 143 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 225 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 349 bp overlap
ChIP OCI-AML3 GSE104745.BRD4.OCI-AML3 255 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 195 bp overlap
ChIP P493-6_MYC_0H GSE42262.BRD4.P493-6_MYC_0H 70 bp overlap
ChIP P493-6_MYC_1H GSE42262.BRD4.P493-6_MYC_1H 349 bp overlap
ChIP SEM GSE83671.BRD4.SEM 88 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 349 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 349 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 349 bp overlap
CDK8 1 dataset
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 84 bp overlap
CDK9 1 dataset
ChIP P493-6 GSE36354.CDK9.P493-6 242 bp overlap
CEBPB 1 dataset
ChIP HL-60_CEBPB_overexpressed GSE100486.CEBPB.HL-60_CEBPB_overexpressed 131 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF364PUR 200 bp overlap
ChIP BLaER1 ENCFF364PUR 83 bp overlap
ChIP BLaER1 ENCFF844FIP 272 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 202 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 219 bp overlap
ETS1 2 datasets
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 349 bp overlap
ChIP THP-6_shEts1 GSE138516.ETS1.THP-6_shEts1 182 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 312 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 349 bp overlap
ChIP DE DE-FOXA2-2 349 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 349 bp overlap
ChIP DE DE-GATA4-2 349 bp overlap
ChIP foregut GSE117136.GATA4.foregut 271 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 349 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 349 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 349 bp overlap
ChIP DE DE-GATA6-2 349 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 321 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 349 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 292 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 349 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 349 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 349 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 349 bp overlap
ChIP foregut GSE117136.GATA6.foregut 349 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 279 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 349 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 349 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 349 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR000BMG.HDAC2.K-562 131 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 202 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 349 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 349 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 303 bp overlap
MED1 3 datasets
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 196 bp overlap
ChIP MOLM-13 GSE154985.MED1.MOLM-13 349 bp overlap
ChIP MOLM-14 GSE65138.MED1.MOLM-14 280 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 294 bp overlap
ChIP K562 ENCFF320GSD 349 bp overlap
NFKB1 2 datasets
ChIP CD4-pos GSE126505.NFKB1.CD4-pos 94 bp overlap
ChIP CD4-pos_ID206 GSE126505.NFKB1.CD4-pos_ID206 75 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 51 bp overlap
PDX1 5 datasets
ChIP H9 ERP004206.PDX1.H9 220 bp overlap
ChIP hESC GSE58685.PDX1.hESC 217 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 349 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 349 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 349 bp overlap
PKNOX1 3 datasets
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 251 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 338 bp overlap
ChIP K562 ENCFF236IUS 349 bp overlap
PTTG1 1 dataset
ChIP K-562 ENCSR314BBS.PTTG1.K-562 349 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 134 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 257 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 349 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 344 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 349 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 245 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 349 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 308 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 349 bp overlap
YY1 2 datasets
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 132 bp overlap
ChIP GM12892 ENCSR000BLT.YY1.GM12892 189 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 73 bp overlap
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