chr11 : 24,155,848 – 24,156,132
284 bp 32 TFs 0 linked genes
This 284 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:24,150,848 – 24,161,132
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 133 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 239 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 182 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 236 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 173 bp overlap
CTCF 122 datasets
ChIP 22Rv1 ENCFF466OXN 284 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 284 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 284 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 180 bp overlap
ChIP BE2C ENCFF757SRF 284 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 176 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 128 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 206 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 145 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 100 bp overlap
ChIP GM23338 ENCFF531QOI 191 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 157 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 106 bp overlap
ChIP H54 ENCFF255TVO 220 bp overlap
ChIP H9 ENCFF152GTF 266 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 232 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 178 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 265 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 201 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 170 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 231 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 185 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 201 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 195 bp overlap
ChIP HEK293 ENCFF498RMM 247 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 245 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 166 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 229 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 190 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 246 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 225 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 160 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 157 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 153 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF194VBQ 252 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 97 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 123 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 132 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 117 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 160 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 205 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 236 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 275 bp overlap
ChIP MCF-7 ENCFF139NQI 272 bp overlap
ChIP MCF-7 ENCFF162GNE 225 bp overlap
ChIP MCF-7 ENCFF198DQX 131 bp overlap
ChIP MCF-7 ENCFF210JUZ 284 bp overlap
ChIP MCF-7 ENCFF414SZG 142 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 131 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 266 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 222 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 245 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 174 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 191 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 193 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 114 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 284 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 284 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 239 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 284 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 241 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 273 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 271 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 223 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 149 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 169 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 210 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 284 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 240 bp overlap
ChIP RWPE2 ENCFF911IEE 284 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 109 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 125 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 280 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 284 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 265 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 284 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 224 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 157 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 168 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 192 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 146 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 238 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 167 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 218 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 117 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 251 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 155 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 248 bp overlap
ChIP endodermal cell ENCFF471YCZ 235 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 148 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 152 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 186 bp overlap
ChIP foreskin fibroblast ENCFF219EBQ 284 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 209 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 284 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 203 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 250 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 206 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 230 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 198 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 198 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 230 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 145 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 190 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 220 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 196 bp overlap
ChIP neural progenitor cell ENCFF420RBO 284 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 244 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 189 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 254 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 219 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 284 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 257 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 150 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 214 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 200 bp overlap
ESR1 13 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 284 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 272 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 277 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 284 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 284 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 272 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 262 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 264 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 277 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 261 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 188 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 284 bp overlap
ChIP T-47D_JC4729 GSE126004.ESR1.T-47D_JC4729 183 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 222 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 225 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 238 bp overlap
GATA6 2 datasets
ChIP PATU8988 GSE47535.GATA6.PATU8988 217 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 218 bp overlap
GLI3 1 dataset
Motif DE_48h DE_48h-GLI3_MA1491.3 15 bp overlap
Gli1 1 dataset
Motif DE_48h DE_48h-Gli1_MA1990.2 10 bp overlap
Gli2 1 dataset
Motif DE_48h DE_48h-Gli2_MA0734.4 9 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 128 bp overlap
MEIS1 1 dataset
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MYC 1 dataset
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 136 bp overlap
NR1H4::RXRA 1 dataset
Motif DE_48h DE_48h-NR1H4RXRA_MA1146.2 13 bp overlap
NR1I2 1 dataset
Motif DE_48h DE_48h-NR1I2_MA1533.2 15 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 202 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 188 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 213 bp overlap
RAD21 16 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 204 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 132 bp overlap
ChIP MCF-7 ENCFF694KOM 284 bp overlap
ChIP MCF-7 ENCFF724VCQ 256 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 280 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 231 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 229 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 211 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 217 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 235 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 200 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 182 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 170 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 181 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 284 bp overlap
SMC1A 2 datasets
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 144 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 174 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 195 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 252 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 199 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 256 bp overlap
ZNF143 2 datasets
Motif DE_48h DE_48h-ZNF143_MA0088.2 16 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 201 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 167 bp overlap
Huangfu Lab · Publications · Resources · Contact