chr10 : 109,126,537 – 109,126,852
315 bp 79 TFs 0 linked genes
This 315 bp open chromatin element has no linked target genes and is bound by 79 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:109,121,537 – 109,131,852
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
ASCL1 3 datasets
Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap
Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 134 bp overlap
Ascl2 1 dataset
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
Atoh1 4 datasets
Motif DE_48h DE_48h-Atoh1_MA1467.3 7 bp overlap
Motif DE_48h DE_48h-Atoh1_MA1467.3 7 bp overlap
Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap
Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap
BARX1 2 datasets
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
BHLHE22 1 dataset
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
BSX 2 datasets
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 311 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 222 bp overlap
CTCF 9 datasets
ChIP 22Rv1 ENCFF466OXN 52 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 156 bp overlap
ChIP C4-2B ENCFF821XVN 187 bp overlap
ChIP C4-2B ENCFF821XVN 315 bp overlap
Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
ChIP RWPE2 ENCFF911IEE 83 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 202 bp overlap
ChIP pancreas ENCFF315CUI 51 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 263 bp overlap
DLX1 2 datasets
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
Dlx2 2 datasets
Motif DE_48h DE_48h-Dlx2_MA0885.3 8 bp overlap
Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap
Dlx3 2 datasets
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
Dlx5 2 datasets
Motif DE_48h DE_48h-Dlx5_MA1476.3 8 bp overlap
Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap
EN2 2 datasets
Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap
Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap
ERF::NHLH1 1 dataset
Motif DE_60h DE_60h-ERFNHLH1_MA1938.2 16 bp overlap
FOSL2 1 dataset
Motif DE_60h DE_60h-FOSL2_MA0478.2 10 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 188 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 249 bp overlap
GATA1::TAL1 1 dataset
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 315 bp overlap
ChIP DE DE-GATA4-2 315 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 294 bp overlap
GBX1 2 datasets
Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap
Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap
GBX2 2 datasets
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
Gli1 2 datasets
Motif DE_48h DE_48h-Gli1_MA1990.2 10 bp overlap
Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap
Gli2 2 datasets
Motif DE_48h DE_48h-Gli2_MA0734.4 9 bp overlap
Motif DE_60h DE_60h-Gli2_MA0734.4 9 bp overlap
HAND2 4 datasets
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 186 bp overlap
HESX1 2 datasets
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
HOXA7 2 datasets
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
Hand1::Tcf3 1 dataset
Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap
LBX1 2 datasets
Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap
Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap
LBX2 2 datasets
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
LHX9 2 datasets
Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap
Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 250 bp overlap
MSC 1 dataset
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
MSX1 2 datasets
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 307 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 258 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 144 bp overlap
MYOD1 7 datasets
ChIP RD GSE137168.MYOD1.RD 269 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 251 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 315 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 256 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 315 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 141 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 244 bp overlap
MYOG 5 datasets
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 274 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 205 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 211 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 278 bp overlap
Msx3 2 datasets
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
NEUROD1 6 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 315 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 194 bp overlap
Motif DE_48h DE_48h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_48h DE_48h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 6 datasets
Motif DE_48h DE_48h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_48h DE_48h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 178 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 196 bp overlap
NFATC3 1 dataset
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NHLH1 1 dataset
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap
Neurod2 5 datasets
Motif DE_48h DE_48h-Neurod2_MA0668.3 8 bp overlap
Motif DE_48h DE_48h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Nfat5 1 dataset
Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Nobox 2 datasets
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
Olig2 1 dataset
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 180 bp overlap
PRRX2 2 datasets
Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap
Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap
Pgr 2 datasets
Motif DE_48h DE_48h-Pgr_MA2323.1 17 bp overlap
Motif DE_60h DE_60h-Pgr_MA2323.1 17 bp overlap
Ptf1A 2 datasets
Motif DE_48h DE_48h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap
RAX 2 datasets
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 299 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 256 bp overlap
SOX8 2 datasets
ChIP RH4 GSE116344.SOX8.RH4 242 bp overlap
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 166 bp overlap
TAL1::TCF3 2 datasets
Motif DE_48h DE_48h-TAL1TCF3_MA0091.2 10 bp overlap
Motif DE_60h DE_60h-TAL1TCF3_MA0091.2 10 bp overlap
TFAP4::ETV1 1 dataset
Motif DE_60h DE_60h-TFAP4ETV1_MA1966.2 13 bp overlap
Tcf12 1 dataset
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 199 bp overlap
ZBTB7B 2 datasets
Motif DE_48h DE_48h-ZBTB7B_MA0694.2 10 bp overlap
Motif DE_60h DE_60h-ZBTB7B_MA0694.2 10 bp overlap
ZBTB7C 2 datasets
Motif DE_48h DE_48h-ZBTB7C_MA0695.2 8 bp overlap
Motif DE_60h DE_60h-ZBTB7C_MA0695.2 8 bp overlap
ZFP42 1 dataset
Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap
ZIC1 2 datasets
Motif DE_48h DE_48h-ZIC1_MA0696.1 14 bp overlap
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_48h DE_48h-ZIC4_MA0751.2 14 bp overlap
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_48h DE_48h-ZIC5_MA1584.2 15 bp overlap
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZNF708 1 dataset
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF93 1 dataset
Motif DE_60h DE_60h-ZNF93_MA1721.2 14 bp overlap
ZSCAN16 1 dataset
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
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