Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

39 transcription factors

BCOR 3 datasets

ChIP WA01 GSE104690.BCOR.WA01 179 bp overlap

ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 204 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 355 bp overlap

CEBPB 1 dataset

ChIP WA01 ENCSR000EBV.CEBPB.WA01 138 bp overlap

CHD4 1 dataset

ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 113 bp overlap

CHD7 2 datasets

ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 300 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap

GATA6 3 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 404 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 397 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 389 bp overlap

GTF2I 1 dataset

ChIP WTC11 ENCFF255XXZ 237 bp overlap

KDM1A 2 datasets

ChIP H1 ENCFF696SGD 271 bp overlap

ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 86 bp overlap

LIN54 1 dataset

Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap

MAF 1 dataset

Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap

MAFA 1 dataset

Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap

MYB 1 dataset

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 239 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 486 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 350 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 404 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 450 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 416 bp overlap

ChIP hESC GSE20650.NANOG.hESC 151 bp overlap

ChIP hESC GSE18292.NANOG.hESC 129 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 300 bp overlap

Nr2e1 1 dataset

Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap

PHOX2A 1 dataset

Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap

POLR2A 1 dataset

ChIP GM23338 ENCFF450WCS 467 bp overlap

POU5F1 11 datasets

ChIP GM23338 ENCFF333SNB 311 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 556 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 238 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 379 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 311 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 325 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 243 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 552 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 417 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 215 bp overlap

PRDM14 1 dataset

ChIP hESC GSE22767.PRDM14.hESC 489 bp overlap

RAD21 2 datasets

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 417 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 209 bp overlap

RCOR1 1 dataset

ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 92 bp overlap

RELA 1 dataset

ChIP HeLa-B2_GRKD_DMSO GSE24518.RELA.HeLa-B2_GRKD_DMSO 107 bp overlap

RNF2 1 dataset

ChIP WA09 GSE105028.RNF2.WA09 356 bp overlap

Rhox11 1 dataset

Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 297 bp overlap

SMAD3 1 dataset

Motif DE_12h DE_12h-SMAD3_MA0795.1 10 bp overlap

SMAD5 1 dataset

Motif DE_12h DE_12h-SMAD5_MA1557.1 10 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 355 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 491 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 240 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 291 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 268 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 405 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 298 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 172 bp overlap

TP53 4 datasets

ChIP H9 GSE142050.TP53.H9 165 bp overlap

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 271 bp overlap

ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 233 bp overlap

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 325 bp overlap

ZMYM3 1 dataset

ChIP GM12878 GSE97661.ZMYM3.GM12878 90 bp overlap

ZNF10 2 datasets

ChIP HEK293 ENCFF611ZJI 109 bp overlap

ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 163 bp overlap

ZNF134 3 datasets

ChIP HEK293 GSE76494.ZNF134.HEK293 68 bp overlap

ChIP K-562 ENCSR553NTC.ZNF134.K-562 146 bp overlap

ChIP K562 ENCFF502NWS 123 bp overlap

ZNF317 1 dataset

Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap

ZNF652 1 dataset

Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

Genome Browser