chr10 : 52,040,596 52,041,008
412 bp 36 TFs 1 linked gene
This 412 bp open chromatin element is linked to ENSG00000289527 and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000289527 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:52,035,596 – 52,046,008
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 232 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 149 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 161 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 84 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 99 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 199 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 177 bp overlap
ChIP hESC GSE17917.EP300.hESC 339 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 262 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 156 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 120 bp overlap
IRF4 1 dataset
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 252 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 405 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 348 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 349 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 220 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 135 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 249 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 191 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 223 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 178 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 398 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 349 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 259 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 302 bp overlap
ChIP hESC GSE18292.NANOG.hESC 157 bp overlap
ChIP hESC GSE20650.NANOG.hESC 174 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 186 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 215 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 177 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 198 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 68 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 52 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 326 bp overlap
POU5F1 13 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 379 bp overlap
ChIP GM23338 ENCFF333SNB 215 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 215 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 264 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 74 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 241 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 206 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 188 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 164 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 186 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 265 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 219 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 171 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 181 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 152 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 207 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 233 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 248 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 146 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 178 bp overlap
SMARCC1 5 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 289 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 286 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 328 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 216 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 205 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 133 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 227 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 227 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 188 bp overlap
SPI1 1 dataset
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 107 bp overlap
TBP 3 datasets
ChIP hESC GSE122298.TBP.hESC 238 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 146 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 277 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 216 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 234 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 209 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 136 bp overlap
ZNF384 1 dataset
ChIP HEK293T ENCFF019DZX 391 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap