Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

37 transcription factors

AR 1 dataset

ChIP MCF-7 GSE48930.AR.MCF-7 310 bp overlap

BRD1 1 dataset

ChIP RKO GSE47190.BRD1.RKO 119 bp overlap

BRD3 1 dataset

ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 151 bp overlap

CBX4 1 dataset

ChIP hMSC GSE117084.CBX4.hMSC 84 bp overlap

CEBPA 1 dataset

ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 136 bp overlap

CHD4 1 dataset

ChIP RH5 GSE155861.CHD4.RH5 320 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 290 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 295 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 470 bp overlap

CTCF 3 datasets

ChIP hepatocyte ERP000395.CTCF.hepatocyte 147 bp overlap

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 313 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 370 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF262VBH 234 bp overlap

ChIP BLaER1 ENCFF335XTP 172 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 154 bp overlap

ERG 1 dataset

ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 156 bp overlap

ESR1 1 dataset

ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 157 bp overlap

FOXA1 1 dataset

ChIP liver ERP002306.FOXA1.liver 94 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 318 bp overlap

ChIP DE DE-FOXA2-2 500 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 540 bp overlap

ChIP DE DE-GATA4-2 661 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 474 bp overlap

ChIP DE DE-GATA6-2 642 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 283 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 620 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 471 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 661 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 482 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 573 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 291 bp overlap

MEF2D 3 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 268 bp overlap

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 378 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 263 bp overlap

MYOD1 1 dataset

ChIP RH4 GSE83726.MYOD1.RH4 297 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 182 bp overlap

NEUROG2 1 dataset

ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 164 bp overlap

NFKB1 1 dataset

ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 181 bp overlap

NRL 1 dataset

ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 289 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 569 bp overlap

RELA 16 datasets

ChIP 786-O GSE86092.RELA.786-O 234 bp overlap

ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 400 bp overlap

ChIP HUVEC-C_TNF GSE53998.RELA.HUVEC-C_TNF 218 bp overlap

ChIP HUVEC-C_TNF-30min GSE121890.RELA.HUVEC-C_TNF-30min 167 bp overlap

ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 217 bp overlap

ChIP HUVEC-C_TNF_30M GSE34500.RELA.HUVEC-C_TNF_30M 167 bp overlap

ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 221 bp overlap

ChIP KB_IL GSE52469.RELA.KB_IL 121 bp overlap

ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 166 bp overlap

ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 293 bp overlap

ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 349 bp overlap

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 282 bp overlap

ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 213 bp overlap

ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 186 bp overlap

ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 260 bp overlap

ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 163 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 570 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 651 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 447 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 340 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 429 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 304 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap

SMARCB1 1 dataset

ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 264 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 327 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 401 bp overlap

STAT1_pS727 1 dataset

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 63 bp overlap

ZNF449 1 dataset

ChIP HEK293 GSE76494.ZNF449.HEK293 54 bp overlap

ZNF496 1 dataset

ChIP HEK293T GSE78099.ZNF496.HEK293T 294 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
SVIL		28.8 kb	Distal	Multiome
JCAD		293.8 kb	Distal	Multiome

Genome Browser