Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

40 transcription factors

ATF4 1 dataset

ChIP K562 ENCFF674KTF 67 bp overlap

CTCF 1 dataset

Motif DE_72h DE_72h-CTCF_MA0139.2 15 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 208 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 215 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 820 bp overlap

ChIP DE DE-FOXA2-2 820 bp overlap

FOXH1 1 dataset

Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 140 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 792 bp overlap

ChIP DE DE-GATA4-2 820 bp overlap

ChIP foregut GSE117136.GATA4.foregut 820 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 820 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 820 bp overlap

ChIP DE DE-GATA6-2 820 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 820 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 820 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 820 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 820 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 820 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 820 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 818 bp overlap

ChIP foregut GSE117136.GATA6.foregut 818 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 282 bp overlap

GFI1 1 dataset

Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap

Gfi1B 1 dataset

Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap

HNF1B 1 dataset

ChIP foregut GSE117136.HNF1B.foregut 495 bp overlap

KDM1A 1 dataset

ChIP H1 ENCFF696SGD 375 bp overlap

NANOG 2 datasets

ChIP WA09 GSE105028.NANOG.WA09 215 bp overlap

ChIP hESC GSE18292.NANOG.hESC 174 bp overlap

POU5F1 1 dataset

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 330 bp overlap

RBBP4 1 dataset

ChIP SCMC GSE155861.RBBP4.SCMC 291 bp overlap

RELA 1 dataset

Motif DE_72h DE_72h-RELA_MA0107.1 10 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 284 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 397 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 690 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 382 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 734 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 316 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 359 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 152 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 358 bp overlap

SMARCC1 5 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 245 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 555 bp overlap

ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 250 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 178 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 358 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 175 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 257 bp overlap

SRSF1 1 dataset

ChIP K-562 GSE120104.SRSF1.K-562 76 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 275 bp overlap

TEAD4 1 dataset

ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 137 bp overlap

ZIC1 1 dataset

Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap

ZIC4 1 dataset

Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_72h DE_72h-ZIC5_MA1584.2 15 bp overlap

ZNF140 1 dataset

Motif DE_72h DE_72h-ZNF140_MA1589.2 19 bp overlap

ZNF189 1 dataset

Motif DE_72h DE_72h-ZNF189_MA1725.2 9 bp overlap

ZNF354C 1 dataset

Motif DE_72h DE_72h-ZNF354C_MA0130.1 6 bp overlap

ZNF684 1 dataset

Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap

ZNF701 1 dataset

Motif DE_72h DE_72h-ZNF701_MA1987.2 17 bp overlap

ZNF92 1 dataset

ChIP retina_pigment GSE60024.ZNF92.retina_pigment 152 bp overlap

ZNF93 1 dataset

Motif DE_72h DE_72h-ZNF93_MA1721.2 14 bp overlap

Zic1::Zic2 1 dataset

Motif DE_72h DE_72h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap

Gene	Dist. to TSS	Distance	Link type
EDEM3	58.5 kb	Distal	Multiome
NIBAN1	278.1 kb	Distal	Multiome
C1orf21	309.4 kb	Distal	Multiome+HiCAR
TSEN15	644.7 kb	Distal	Multiome+HiCAR

Genome Browser