chr10 : 3,180,434 3,180,670
236 bp 28 TFs 1 linked gene
This 236 bp open chromatin element is linked to PITRM1 and is bound by 28 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PITRM1 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:3,175,434 – 3,185,670
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP HCT-116 GSE57628.BRD4.HCT-116 157 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 197 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 236 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 227 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 163 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 104 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 233 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 76 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 137 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 68 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 123 bp overlap
E2F1 2 datasets
ChIP HeLa GSE22478.E2F1.HeLa 161 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 236 bp overlap
E2F6 6 datasets
ChIP A-549 ENCSR000BTC.E2F6.A-549 187 bp overlap
ChIP H1 ENCFF785DWK 236 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 215 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 181 bp overlap
ChIP K562 ENCFF136LTS 152 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 236 bp overlap
ELF1 3 datasets
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 121 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 198 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 204 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 144 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 95 bp overlap
GABPA 1 dataset
ChIP Hep-G2 ENCSR269TNX.GABPA.Hep-G2 144 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 113 bp overlap
L3MBTL2 4 datasets
ChIP HEK293T ENCFF482NJV 236 bp overlap
ChIP HEK293T ENCFF482NJV 180 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 236 bp overlap
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 236 bp overlap
MAX 6 datasets
ChIP H1 ENCFF601FOM 236 bp overlap
ChIP H1 ENCFF914VQY 228 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 110 bp overlap
ChIP K562 ENCFF524IJO 236 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 161 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 201 bp overlap
MGA 2 datasets
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 138 bp overlap
ChIP A-549_empty GSE112188.MGA.A-549_empty 207 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 118 bp overlap
NRF1 12 datasets
ChIP Hep-G2 ENCSR853ADA.NRF1.Hep-G2 180 bp overlap
ChIP HepG2 ENCFF694NVY 236 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 221 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 210 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 190 bp overlap
ChIP K-562_Ab_R157-1-3H1 GSE97661.NRF1.K-562_Ab_R157-1-3H1 156 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 206 bp overlap
ChIP K562 ENCFF130SGK 206 bp overlap
ChIP K562 ENCFF689EWI 236 bp overlap
ChIP MCF-7_Ab_R157-1-3D4 GSE97661.NRF1.MCF-7_Ab_R157-1-3D4 187 bp overlap
ChIP MCF-7_Ab_R157-1-3H1 GSE97661.NRF1.MCF-7_Ab_R157-1-3H1 118 bp overlap
ChIP T-47D_HAEGIN2 GSE59935.NRF1.T-47D_HAEGIN2 221 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 122 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 126 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 236 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 236 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 236 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF584VSB 236 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 136 bp overlap
THAP1 2 datasets
ChIP K-562 ENCSR000BNN.THAP1.K-562 235 bp overlap
ChIP K562 ENCFF851EDE 195 bp overlap
YY1 28 datasets
ChIP A-549 ENCSR000BPM.YY1.A-549 236 bp overlap
ChIP GM12878 ENCFF908JTL 143 bp overlap
ChIP GM12892 ENCFF802MHJ 236 bp overlap
ChIP GM12892 ENCSR000BLT.YY1.GM12892 199 bp overlap
ChIP H1 ENCFF524BTL 212 bp overlap
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 204 bp overlap
ChIP HCT116 ENCFF497ZQZ 236 bp overlap
ChIP HEK293 ENCSR859RAO.YY1.HEK293 168 bp overlap
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 233 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 236 bp overlap
ChIP HepG2 ENCFF956MUY 152 bp overlap
ChIP Ishikawa ENCFF505XQX 236 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 179 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 226 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 202 bp overlap
ChIP K-562 ENCSR000EWF.YY1.K-562 183 bp overlap
ChIP K562 ENCFF199FNC 236 bp overlap
ChIP K562 ENCFF660QRE 213 bp overlap
ChIP K562 ENCFF768DPZ 236 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 201 bp overlap
ChIP NT2/D1 ENCFF999MII 236 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap
ChIP SK-N-SH ENCFF087JSD 234 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 216 bp overlap
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 214 bp overlap
ChIP WA01 GSE39096.YY1.WA01 234 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 223 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 175 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 138 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 236 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 116 bp overlap