chr9 : 132,782,950 132,783,328
378 bp 48 TFs 0 linked genes
This 378 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:132,777,950 – 132,788,328
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 378 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 246 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DPRX 1 dataset
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
DUX4 3 datasets
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 351 bp overlap
DUXA 1 dataset
Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 279 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 378 bp overlap
ChIP DE DE-FOXA2-2 378 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 378 bp overlap
ChIP DE DE-GATA4-2 378 bp overlap
ChIP foregut GSE117136.GATA4.foregut 378 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 378 bp overlap
ChIP DE DE-GATA6-2 378 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 367 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 352 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 335 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 378 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 378 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 363 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 378 bp overlap
ChIP foregut GSE117136.GATA6.foregut 373 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HSF1 1 dataset
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 191 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 121 bp overlap
IKZF2 1 dataset
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 91 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 183 bp overlap
MITF 1 dataset
Motif DE_72h DE_72h-MITF_MA0620.4 10 bp overlap
MXI1 1 dataset
Motif DE_72h DE_72h-MXI1_MA1108.3 6 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PHOX2A 2 datasets
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PROX1 1 dataset
Motif DE_72h DE_72h-PROX1_MA0794.1 12 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 148 bp overlap
SIX1 1 dataset
Motif DE_72h DE_72h-SIX1_MA1118.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 350 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 334 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 318 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 306 bp overlap
SPIC 1 dataset
Motif DE_72h DE_72h-SPIC_MA0687.2 13 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 142 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 207 bp overlap
Six4 1 dataset
Motif DE_72h DE_72h-Six4_MA2001.2 7 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 125 bp overlap
TEAD4 3 datasets
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 119 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 288 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 246 bp overlap
THRA 2 datasets
Motif DE_72h DE_72h-THRA_MA1969.2 18 bp overlap
Motif DE_72h DE_72h-THRA_MA1969.2 18 bp overlap
THRB 1 dataset
Motif DE_72h DE_72h-THRB_MA1576.2 18 bp overlap
Thap11 1 dataset
Motif DE_72h DE_72h-Thap11_MA1573.2 14 bp overlap
USF1 1 dataset
Motif DE_72h DE_72h-USF1_MA0093.4 10 bp overlap
YY1AP1 1 dataset
ChIP T-47D_E2 GSE125594.YY1AP1.T-47D_E2 303 bp overlap
ZNF416 1 dataset
Motif DE_72h DE_72h-ZNF416_MA1979.2 10 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap