Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

AR 1 dataset

ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 140 bp overlap

Bcl11B 1 dataset

Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap

CEBPD 1 dataset

Motif DE_36h DE_36h-CEBPD_MA0836.3 8 bp overlap

CLOCK 1 dataset

ChIP U2OS GSE44236.CLOCK.U2OS 177 bp overlap

CREB1 1 dataset

Motif DE_36h DE_36h-CREB1_MA0018.5 8 bp overlap

CTCF 1 dataset

ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 345 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF335XTP 204 bp overlap

DUX4 1 dataset

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

ESR1 2 datasets

ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 196 bp overlap

ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 109 bp overlap

EZH2 2 datasets

ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 239 bp overlap

ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 237 bp overlap

FOS 1 dataset

Motif DE_36h DE_36h-FOS_MA1951.2 13 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 320 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 324 bp overlap

ChIP DE DE-GATA4-2 444 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 330 bp overlap

ChIP DE DE-GATA6-2 401 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 673 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 632 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 636 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 509 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 260 bp overlap

Gli1 1 dataset

Motif DE_36h DE_36h-Gli1_MA1990.2 10 bp overlap

HDAC1 1 dataset

ChIP PC-3 GSE147455.HDAC1.PC-3 159 bp overlap

Hmx2 1 dataset

Motif DE_36h DE_36h-Hmx2_MA0897.2 15 bp overlap

Hmx3 1 dataset

Motif DE_36h DE_36h-Hmx3_MA0898.2 9 bp overlap

ISL2 1 dataset

Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap

Irf1 1 dataset

Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap

JUN 3 datasets

Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap

ChIP DE_D1 S08-DE-d1-JUN-exp1 316 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 391 bp overlap

MAFF 1 dataset

Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap

MED1 1 dataset

ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 175 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap

MZF1 3 datasets

Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap

Motif DE_36h DE_36h-MZF1_MA0056.3 8 bp overlap

Motif DE_60h DE_60h-MZF1_MA0056.3 8 bp overlap

Mafb 1 dataset

Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 215 bp overlap

NRL 1 dataset

Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap

Nkx3-2 1 dataset

Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap

POLR2A 1 dataset

ChIP spleen ENCFF446ZGT 241 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 113 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 129 bp overlap

SALL2 1 dataset

ChIP HEK293 GSE145940.SALL2.HEK293 229 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 332 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 455 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 535 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 365 bp overlap

SPIB 1 dataset

Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap

TBX19 1 dataset

Motif DE_36h DE_36h-TBX19_MA0804.2 17 bp overlap

Wt1 3 datasets

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

Motif DE_36h DE_36h-Wt1_MA1627.2 10 bp overlap

Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap

Yy1 1 dataset

Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 231 bp overlap

ZFP42 1 dataset

Motif DE_36h DE_36h-ZFP42_MA1651.2 13 bp overlap

ZIC4 3 datasets

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap

Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap

ZIC5 3 datasets

Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap

Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap

Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap

ZNF214 3 datasets

Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap

Motif DE_36h DE_36h-ZNF214_MA1975.2 13 bp overlap

Motif DE_60h DE_60h-ZNF214_MA1975.2 13 bp overlap

Genome Browser