chr7 : 132,901,104 132,901,590
486 bp 51 TFs 0 linked genes
This 486 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:132,896,104 – 132,906,590
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 171 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 141 bp overlap
DUX4 2 datasets
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
DUXA 2 datasets
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap
Dux 2 datasets
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 127 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 172 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 289 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 103 bp overlap
ChIP DE DE-FOXA2-1 396 bp overlap
ChIP DE DE-FOXA2-2 440 bp overlap
FOXD3 2 datasets
Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap
Motif DE_72h DE_72h-FOXD3_MA0041.3 14 bp overlap
GATA1 3 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 217 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 237 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 173 bp overlap
GATA2 8 datasets
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 288 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 243 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 148 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 371 bp overlap
ChIP dermal-fibroblast GSE51025.GATA2.dermal-fibroblast 153 bp overlap
GATA3 4 datasets
ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 168 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 338 bp overlap
ChIP WA09 GSE105081.GATA3.WA09 179 bp overlap
GATA4 10 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 184 bp overlap
ChIP DE DE-GATA4-1 486 bp overlap
ChIP DE DE-GATA4-2 486 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 332 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 382 bp overlap
ChIP foregut GSE117136.GATA4.foregut 369 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 332 bp overlap
GATA5 1 dataset
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 20 datasets
ChIP AGS GSE51705.GATA6.AGS 245 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 317 bp overlap
ChIP DE DE-GATA6-1 397 bp overlap
ChIP DE DE-GATA6-2 486 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 381 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 347 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 453 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 486 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 456 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 443 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 475 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 467 bp overlap
ChIP foregut GSE117136.GATA6.foregut 345 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 354 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 276 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 279 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 220 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 223 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 259 bp overlap
Gata3 3 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 242 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 358 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 171 bp overlap
Mecom 2 datasets
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 149 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 154 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHG.NR3C1.A-549 120 bp overlap
Nfat5 2 datasets
Motif DE_48h DE_48h-Nfat5_MA0606.3 8 bp overlap
Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap
Nr2e1 1 dataset
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
PHOX2A 2 datasets
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 234 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 213 bp overlap
RAD21 1 dataset
ChIP hiPSC_HUES9 GSE106870.RAD21.hiPSC_HUES9 132 bp overlap
RBPJ 1 dataset
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 428 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 329 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 359 bp overlap
STAT3 1 dataset
Motif DE_48h DE_48h-STAT3_MA0144.3 9 bp overlap
Stat6 1 dataset
Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TFAP2A 3 datasets
Motif DE_48h DE_48h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_72h DE_72h-TFAP2A_MA0003.5 9 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 444 bp overlap
TFAP2B 3 datasets
Motif DE_48h DE_48h-TFAP2B_MA0812.2 9 bp overlap
Motif DE_72h DE_72h-TFAP2B_MA0812.2 9 bp overlap
ChIP SK-N-SH ENCFF869XXQ 362 bp overlap
TFAP2C 3 datasets
Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_72h DE_72h-TFAP2C_MA0814.3 9 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 379 bp overlap
TFAP2E 2 datasets
Motif DE_48h DE_48h-TFAP2E_MA1569.2 9 bp overlap
Motif DE_72h DE_72h-TFAP2E_MA1569.2 9 bp overlap
TRPS1 4 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ChIP MCF-7 GSE133072.TRPS1.MCF-7 202 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 285 bp overlap
ZBTB6 1 dataset
Motif DE_48h DE_48h-ZBTB6_MA1581.2 9 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 189 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 123 bp overlap
ZNF652 1 dataset
Motif DE_48h DE_48h-ZNF652_MA1657.2 9 bp overlap